TCONS_00049812-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049812-protein
Unique NameTCONS_00049812-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length335

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049812-protein ID=TCONS_00049812-protein|Name=TCONS_00049812-protein|organism=Clytia hemisphaerica|type=polypeptide|length=335bp
MAGVTTFFSRKLIDGKHLSKFSKSVRLLLHDGKVASRSMSTDLDLSGIYP
PIPTPFKANEDVDWHSLKSNLDKWSAVPFKGYVVQGSNGEYVSLSTEEKI
DMVQFVAENVESNKTILVGSGCEGTKETIELTNEMAKKGAHAALVVTPAF
FKNRMNSAAMINHYTQVADASSIPVILYNVPSNTGFEFPVDAIIKLSEHP
NIIGFKDSGGNITNIGHIISETRERGFQVLAGGASFLMASMNLGAVGGIC
ALANILGQECCDLATLCKEGRLDEARELQLKLIAPNQAVTRKYNVPALKY
AMDLCGYYGGPSRSPLGPLNELEMKDVKNCFKEYC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031575XLOC_031575Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049812TCONS_00049812Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002220DapA-like
IPR013785Aldolase_TIM
IPR020625Schiff_base-form_aldolases_AS
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016829 lyase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002220DapA-likePRINTSPR00146DHPICSNTHASEcoord: 78..99
score: 36.21
coord: 114..132
score: 30.0
coord: 173..190
score: 43.15
IPR002220DapA-likeSMARTSM01130DHDPS_2coord: 44..335
e-value: 2.8E-83
score: 292.6
IPR002220DapA-likePFAMPF00701DHDPScoord: 45..332
e-value: 1.6E-56
score: 191.1
IPR002220DapA-likePIRSFPIRSF001365DHDPScoord: 42..334
e-value: 9.1E-79
score: 262.0
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 39..335
e-value: 1.9E-94
score: 315.6
IPR020625Schiff base-forming aldolase, active sitePROSITEPS00666DHDPS_2coord: 178..208
NoneNo IPR availableCDDcd00408DHDPS-likecoord: 48..321
e-value: 1.11113E-91
score: 276.736
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 45..333

Blast
[Close]
BLAST of TCONS_00049812-protein vs. Swiss-Prot (Human)
Match: HOGA1 (4-hydroxy-2-oxoglutarate aldolase, mitochondrial OS=Homo sapiens GN=HOGA1 PE=1 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 5.411e-118
Identity = 155/289 (53.63%), Postives = 218/289 (75.43%), Query Frame = 0 
Query:   43 LDLSGIYPPIPTPFKANEDVDWHSLKSNLDKWSAVPFKGYVVQGSNGEYVSLSTEEKIDMVQFVAENVESNKTILVGSGCEGTKETIELTNEMAKKGAHAALVVTPAFFKNRMNSAAMINHYTQVADASSIPVILYNVPSNTGFEFPVDAIIKLSEHPNIIGFKDSGGNITNIGHIISETRERGFQVLAGGASFLMASMNLGAVGGICALANILGQECCDLATLCKEGRLDEARELQLKLIAPNQAVTRKYNVPALKYAMDLCGYYGGPSRSPLGPLNELEMKDVKNCF 331
            +D++GIYPP+ TPF A  +VD+  L+ NL K    PF+G+VVQGSNGE+  L++ E++++V  V + +  N+ +L GSGCE T+ T+E+T  MA+ GA AA+VVTP +++ RM+SAA+I+HYT+VAD S IPV+LY+VP+NTG + PVDA++ LS+HPNI+G KDSGG++T IG I+ +TR++ FQVLAG A FLMAS  LGAVGG+CALAN+LG + C L  LC  G+ ++A++LQ +LI PN AVTR++ +P LK  MD  GYYGGP R+PL  L+  E + ++  F
Sbjct:   33 VDIAGIYPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQHPNIVGMKDSGGDVTRIGLIVHKTRKQDFQVLAGSAGFLMASYALGAVGGVCALANVLGAQVCQLERLCCTGQWEDAQKLQHRLIEPNAAVTRRFGIPGLKKIMDWFGYYGGPCRAPLQELSPAEEEALRMDF 321
The following BLAST results are available for this feature:
BLAST of TCONS_00049812-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HOGA15.411e-11853.634-hydroxy-2-oxoglutarate aldolase, mitochondrial O... [more]
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