TCONS_00049817-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049817-protein
Unique NameTCONS_00049817-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length131

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049817-protein ID=TCONS_00049817-protein|Name=TCONS_00049817-protein|organism=Clytia hemisphaerica|type=polypeptide|length=131bp
MVNAEEVRHTGGCHCGAVRYEMYAPRILNCVRCNCSICVKKQHLMYVPAN
KFKLIQGEENITTYTYNTHQAKHKFCKICGIHSFYMPRAYPGRYGVMVHC
LDPGTVDEMLIEEFDGVNYETSLKAANEIKQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031579XLOC_031579Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049817TCONS_00049817Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006913GFA/CENP-V
IPR011057Mss4-like
Vocabulary: Molecular Function
TermDefinition
GO:0016846carbon-sulfur lyase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0016846 carbon-sulfur lyase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1590.10coord: 2..124
e-value: 2.0E-27
score: 95.3
IPR006913Glutathione-dependent formaldehyde-activating enzyme/centromere protein VPFAMPF04828GFAcoord: 32..103
e-value: 7.4E-8
score: 32.5
IPR011057Mss4-likeSUPERFAMILY51316Mss4-likecoord: 7..104

Blast
[Close]
BLAST of TCONS_00049817-protein vs. Swiss-Prot (Human)
Match: CENPV (Centromere protein V OS=Homo sapiens GN=CENPV PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 4.162e-51
Identity = 71/125 (56.80%), Postives = 96/125 (76.80%), Query Frame = 0 
Query:    7 VRHTGGCHCGAVRYEMYAPRILNCVRCNCSICVKKQHLMY-VPANKFKLIQGEENITTYTYNTHQAKHKFCKICGIHSFYMPRAYPGRYGVMVHCLDPGTVDEMLIEEFDGVNYETSLKAANEIK 130
            V+HTGGCHCGAVR+E++A   L+   CNCSIC KKQ+  + VPA++FKL++G E+ITTYT+NTH+A+H FCK CG+ SFY PR+ PG +G+  HCLD GTV  M+ EEF+G ++E ++K    IK
Sbjct:  146 VKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNRHFIVPASRFKLLKGAEHITTYTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDEGTVRSMVTEEFNGSDWEKAMKEHKTIK 270
The following BLAST results are available for this feature:
BLAST of TCONS_00049817-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CENPV4.162e-5156.80Centromere protein V OS=Homo sapiens GN=CENPV PE=1... [more]
back to top