TCONS_00049868-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049868-protein
Unique NameTCONS_00049868-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length325

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049868-protein ID=TCONS_00049868-protein|Name=TCONS_00049868-protein|organism=Clytia hemisphaerica|type=polypeptide|length=325bp
AFTLDPDQVWQLNYYEGNKTFPENRTRNNTNIGTLYPGTAIEIDWSIESY
IAFSNGQNSGIDIDQLSGICLTDLSTCVNGFSLSLWIKWDQWATDFIISS
SKFNWKHFTEDTIPIEVWNGEDKAWRLFHSRDTTKKWSFYVITWSKDDGI
TVFVDGVKDLRNTIEATSSMFNPFNQMKPQRISLGKSAAKVSPESPRPNI
SLRRFAIWNKQLSEDEVLTVYQQEASPMEFTGISSAGPISYSLFTEHANH
TLTGHTFKTIFVQNQIECFEKCTIEYKVRCKSYNFGVQKETKICELNEKR
KSDVARWFFTSSTEEFHFNYYEIME
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031622XLOC_031622Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049868TCONS_00049868Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003609Pan_app
IPR013320ConA-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 321..325
NoneNo IPR availablePFAMPF13385Laminin_G_3coord: 71..217
e-value: 8.5E-12
score: 45.4
NoneNo IPR availableGENE3D2.60.120.200coord: 8..231
e-value: 4.9E-14
score: 52.3
NoneNo IPR availableGENE3D3.50.4.10coord: 241..324
e-value: 4.6E-9
score: 35.7
NoneNo IPR availableSUPERFAMILY57414Hairpin loop containing domain-likecoord: 244..311
IPR003609PAN/Apple domainPFAMPF00024PAN_1coord: 244..304
e-value: 2.9E-8
score: 33.5
IPR003609PAN/Apple domainPROSITEPS50948PANcoord: 239..325
score: 7.347
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 14..223

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049868-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top