TCONS_00049923-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049923-protein
Unique NameTCONS_00049923-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1135

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049923-protein ID=TCONS_00049923-protein|Name=TCONS_00049923-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1135bp
DKTQNENINKNNQLDNEDFMVMDSPAQRFLFQRKNEKIDWRKFASIDVDR
VAREIDVDAIQENIVAVTYCNIEHELGYNELDPNFVKLYRLAQLTIEYLL
HCQEYLQQNLEEKDLSIKQLNENIAQNNADAENVKNELVNRNTAYKNLKK
EFQKARKMIGEYQLMIRAGANGLHKCSNCDKSFVSESYLRSHIERRHPEE
AQKRYVSQYQSVNSNLDMVNELTEIKSRLKMTEDQLGRERETFSLTKAQD
NERSVAVMENLRQQNEDWRLQEENKMKEEMENYKNLMMGELRQTQKEKEL
LQQSIFELQQKNGKKKSNLGDLMDDDEKTSYKDLFDKMKGLESELLEQIN
TLREQHKKEEAAHKIVFTKKLAQEKDKQDKLAKQRDKDKMFYEDQIIALK
QRLTEHDAQIEENTKKATLAVDRADSRSEKENILSRSTKDEVDSRPIPPK
RSLPYPSQEVEIVEKELPEKDGVTLWVSMNQSLTQPSFRVFKTPSSAQGD
WKDLFSFNALMEPVGDFTKALYVYSCPGSPYWRQYVSGSATLPKSNYKHD
FTFYTTTEKLLGTVKITVYEAGSGSVVRSMIHKGDTVPGPEWRQNSSALY
VLKTGPAKTSITRSGTFNSDIFDGVSDDDDVSVSTITGTDIVKNLIADDI
KRSRENLLEDKDDVNIGDDTKGEFKEEELYSDEEEESDLHDDEVDARVHE
QEKEKENELKRTQESNFGTSSSSFLNATLPEKGEFYPYKHNPLAVARYNH
SKEMLSGQRKEMLDILDDHLEKRGLDPDERRMAHQVYKKKLAHLVKEQEM
KNKTFPGFTHYRQKLKDAVDDFTFQEWAKKKGKKAGKRFKQAAGAIKGLV
QAVKKSPIREEIKQDRHSSTFDDDESFEGSDSDETSPPPADKKQRKIYTK
DLEEVSSTENERVMLRYQRAMDSDEESIVQRNDEETNEQPHEEEEDLSGT
WDTDEDDDLDETDEHQRHQNQPQSPPQYYHQQEEEEYRPKMRSPQGEKVK
ELTKNLEASLTLRGSIKKPAGAVDLHHTQEKDENELKPKRSVSFRDQNQY
HGGGNMEDEDDESDFSLSSNDNTRENQDNSQNKGSYRPSTSKPPAPSSSS
TPYGASTAGPSRQQQQSTAVTKFTLEDFDDDDESF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031645XLOC_031645Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049923TCONS_00049923Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR032714DZIP1_N
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 258..278
NoneNo IPR availableCOILSCoilCoilcoord: 342..362
NoneNo IPR availableCOILSCoilCoilcoord: 396..416
NoneNo IPR availableCOILSCoilCoilcoord: 103..165
NoneNo IPR availableCOILSCoilCoilcoord: 291..311
NoneNo IPR availableGENE3D3.30.160.60coord: 102..213
e-value: 2.7E-4
score: 20.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 662..723
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 854..1135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 421..454
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 174..197
e-value: 0.0046
score: 26.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 176..197
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 174..202
score: 11.177
IPR032714Zinc finger protein DZIP1, N-terminalPFAMPF13815Dzip-like_Ncoord: 29..152
e-value: 1.9E-34
score: 118.0

Blast
[Close]
BLAST of TCONS_00049923-protein vs. Swiss-Prot (Human)
Match: DZIP1 (Zinc finger protein DZIP1 OS=Homo sapiens GN=DZIP1 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.844e-48
Identity = 125/397 (31.49%), Postives = 213/397 (53.65%), Query Frame = 0 
Query:   25 PAQRFLFQRKNEKIDWRKFASIDVDRVAREIDVDAIQENIVAVTYCNIEHE---LGYNELDPNFVKLYRLAQLTIEYLLHCQEYLQQNLEEKDLSIKQLNENIAQNNADAENVKNELVNRNTAYKNLKKEFQKARKMIGEYQLMIRAGANGLHKCSNCDKSFVSESYLRSHIERRHPEEAQKRYVSQYQSVNSNLDMVNELTEIKSRLKMTEDQLGRERETFSLTKAQDNERSVAVMENLRQQNEDWRLQEENKMKEEMENYKNLMMGELRQTQKEKELLQQSIFELQQKNGKKKSNLGDLMDDDE----KTSY-KDLFDKMKGL---ESELLEQINTLREQHKKEEAAHKIVFTKKLAQEKDKQDKLAKQRDKDKMFYEDQIIALKQRLTEHDAQI 410
            P   F F+ + E +DWR+ ++IDVD+VA  +DV  +QENI+ +T+C +E E      + +DP  +KL RLAQ TIEYLLH QE+L   L         L E +  ++ D E  K  L  +    K LK+E ++ +KMI   QLMI A AN  ++C  CDK+F+++++L+SHI+RRH EE       +YQ       + +E+  +K  L++T  +L       ++  +++ E      E+  +  + W+ +E+ K+ +EME  K + M E ++   +   L+  + E+Q+ N + KSN+G L D  E    ++ Y +D  + M+ L   ES+   ++  + ++HKKE+        + L+  +  +  +    +   +FY+ +I  L QRL E +  I
Sbjct:   54 PLPFFQFRPRLESVDWRRLSAIDVDKVAGAVDVLTLQENIMNITFCKLEDEKCPHCQSGVDPVLLKLIRLAQFTIEYLLHSQEFLTSQLH-------TLEERLRLSHCDGEQSKKLLTKQAGEIKTLKEECKRRKKMISTQQLMIEAKAN-YYQCHFCDKAFMNQAFLQSHIQRRHTEENSH---FEYQKNAQIEKLRSEIVVLKEELQLTRSELEAAHHASAVRFSKEYEMQKTKEEDFLKLFDRWKEEEKEKLVDEMEKVKEMFMKEFKELTSKNSALEYQLSEIQKSNMQIKSNIGTLKDAHEFKEDRSPYPQDFHNVMQLLDSQESKWTARVQAIHQEHKKEKG-------RLLSHIEKLRTSMIDDLNASNVFYKKRIEELGQRLQEQNELI 432
The following BLAST results are available for this feature:
BLAST of TCONS_00049923-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DZIP14.844e-4831.49Zinc finger protein DZIP1 OS=Homo sapiens GN=DZIP1... [more]
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