TCONS_00049940-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049940-protein
Unique NameTCONS_00049940-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length224

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049940-protein ID=TCONS_00049940-protein|Name=TCONS_00049940-protein|organism=Clytia hemisphaerica|type=polypeptide|length=224bp
ETFKMASNFGTKFYSLVTIEELKILFVGTGDVRDIYIQDKFSTNFTYAFV
RFKTIEECVNACTQLHGTILHGSAIWVTLAESTTNRINNKPSQRSSNKDR
SILKPSQPRREGAHYVSSQKDENEIHKKLTDSLTELKKDNELTRWIGIDR
NDEAEVQNYMVDFKDGLVAMAKIPEAVGVEAKSFEKNQDMDDLQKLIISH
HSCATPSEEYLPFKNIDFDARAKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031654XLOC_031654Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049940TCONS_00049940Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.330coord: 8..103
e-value: 4.6E-11
score: 42.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..121
NoneNo IPR availableCDDcd00590RRM_SFcoord: 17..77
e-value: 1.73631E-9
score: 50.7665
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 17..75
e-value: 1.4E-6
score: 27.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 2..82
score: 9.183
IPR000504RNA recognition motif domainSUPERFAMILY54928RNA-binding domain, RBDcoord: 17..93

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049940-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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