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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00050073-protein ID=TCONS_00050073-protein|Name=TCONS_00050073-protein|organism=Clytia hemisphaerica|type=polypeptide|length=726bp
MVNVSSCPQCSLSIVSNNGIHWSCVNATCQHYHSDVFKQINLDGVSKQLA
DSIQQQNGPLTHQLATTNQGIPNPNQNHHNNQQFENYPTQLNSDPQNGFM
NQHAQNIGTQQLHNHNQHPMSFTSTNQAQNMYFNQQPLTNINFEQPCQNF
AIPKNVQQLQNQDSLPDSGCSSWQSPQTNANILRQQFHQQITTFQDVHSP
PDDVFTELFNTASGANPHLTDISSGGIQTANYLSQTATSPKEVHIFCTEC
SAKLAGENPKFCQRCGTEVPRKSIASISSEQSCSSSPVNVTTRKRTFAES
ESTSFKSSFEQQNIQSSSFNACNEWTGDVSMPPDVTPPNSANGSFTGTTS
LSFLGFPDNAFSENSSPTNPQCQINDHREGKNLRQLLQEPHCSQQQSTAI
QQSVLPQIAETQDLNFTLDNEEMNNDKIDTGLTTNVNTLKIASPSQQKNP
FTPDYEVDDSGYTQFHRLVKEGKLQEALDVLNKIPLHQKYKYVNHRNHRG
YVALHTALQDFNKKFIIALLSHGADVYITDRNGNNIIHQIIKNPDFDESH
VLALIQIIFKELDELKIQALVNDESKSFNADGYSIIHEVVRKKYLEVLKY
LRQSAKLNLNAIDRKEKQTGLVMACKGRDWETANLLMKMEACVNIPTSSE
WYPVHAALEDHNEEMLDVFMNNGVDIYGYKECGNGSIMKKCEKYMRSRRR
KNPGGDRGSKKRRRCKCGDTKSSVME Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 649..678
e-value: 170.0
score: 10.8
coord: 499..528
e-value: 0.92
score: 18.5
coord: 616..645
e-value: 330.0
score: 8.6
coord: 581..611
e-value: 0.91
score: 18.6 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 499..531
score: 10.259 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 231..404
e-value: 0.039
score: 13.1 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 454..689
e-value: 5.4E-29
score: 100.5 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 460..681
score: 20.765 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 451..675 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 695..726 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 63..89 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 456..601
e-value: 6.82035E-14
score: 68.179 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 579..676
e-value: 3.44573E-9
score: 54.3118 |
Blast
The following BLAST results are available for this feature:
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