TCONS_00050211-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050211-protein
Unique NameTCONS_00050211-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length684

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050211-protein ID=TCONS_00050211-protein|Name=TCONS_00050211-protein|organism=Clytia hemisphaerica|type=polypeptide|length=684bp
SFWDLVKEVTHKDVVTQLKHLVVTTDVGLCRSWIRLALNDCLIVSYLDAI
LADKTHLSRYYAPNAFLMDSELPFILKDFLQGLMHFEFRLNYNSSKLNTW
EMEPLELAGLVKTDKNQTLKGEGVTTDSKSAQTAKLKDVTKQTNSPTTDK
KIKHKRGPAQSSARKSLGSLPKTSSLVKEGSTSSMKSIDDEPKLKSRITA
VEDLPIAKSSFLERNKEKTDSATEKTGDNYQIENKIKITLENPNNENQSR
SSTPKDKEITENAENFQEDPESIATVIQETPPRVLGNRLGGLGWSGWSSQ
FEEDENDGQISRDVESPKTPLLHKEEFKTFDSLLKSYGNNTETLSSSLEL
SSDAHQIEDDVVENVNEDGDSKLKGDSEAISDKDKSPATSPTADPAVNQT
FEIVPMDTQLQGENVDKRTQSSLSQLTELGLEWGLDKQNFQCRHCNKAIG
LIYGPYRVCHFDGGYYCLDCHDDEQYYVPANVISQWEFKKFKVSRYNKLF
LMKIEEEPLFHMDELNPKLYEHIASLQEVKTLRQQLQYVKEYIQTCRNEI
AEDFRIRLWPREYLCDDIHQYSLLDLIQVHSGQLSHHLKKVIAQFTKHIY
KCTLCCQKGFICEYCNDTQIIYPFQIDIAVQCPGCLSTFHRVCRQDKRCP
KCVRIHLRTQSSQKDEMERRLTVTSKESIGIGVF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031812XLOC_031812Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050211TCONS_00050211Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004012Run_dom
IPR025258Zf-RING_9
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004012RUN domainSMARTSM00593893paper3coord: 30..93
e-value: 9.5E-14
score: 61.7
IPR004012RUN domainPFAMPF02759RUNcoord: 26..92
e-value: 3.4E-13
score: 49.6
IPR004012RUN domainPROSITEPS50826RUNcoord: 1..95
score: 25.071
IPR025258Putative zinc-RING and/or ribbonSMARTSM01175DUF4206_2coord: 457..659
e-value: 1.1E-96
score: 337.2
IPR025258Putative zinc-RING and/or ribbonPFAMPF13901zf-RING_9coord: 457..655
e-value: 1.3E-61
score: 208.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..397
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..191
NoneNo IPR availableSUPERFAMILY140741RUN domain-likecoord: 1..99

Blast
[Close]
BLAST of TCONS_00050211-protein vs. Swiss-Prot (Human)
Match: PKHM3 (Pleckstrin homology domain-containing family M member 3 OS=Homo sapiens GN=PLEKHM3 PE=2 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 1.315e-65
Identity = 114/252 (45.24%), Postives = 155/252 (61.51%), Query Frame = 0 
Query:  419 TQSSLSQLTELGLEWGLDKQNFQCRHCNKAIGLIYGPYRVCHFDGGYYCLDCHDDEQYYVPANVISQWEFKKFKVSRYNKLFLMKIEEEPLFHMDELNPKLYEHIASLQEVKTLRQQLQYVKEYIQTCRNEIAEDFRIRLWPREYLCDDIHQYSLLDLIQVHSGQLSHHLKKVIAQFTKHIYKCTLCCQKGFICEYCNDTQIIYPFQIDIAVQCPGCLSTFHRVCRQDK-RCPKCVRIHLRTQSSQKDEMER 669
            T S LS LT L LE GL  Q+F+C  C ++IGL  G  +VC++ G YYC  CH D+ + +PA ++  W+  K+KVS+  K FL  + EEPL  + + N  LY H   L  V  LRQ+L+ ++ Y+ +CR  +AED R R++PREYL   IH YSL DL QV  G+L+  L KVI   T H+Y C+LC QKGFICE CN+ +I+YPF+     +C  C + FH  C++    CP+CVR  L  Q  QK   +R
Sbjct:  491 TTSFLSILTTLSLERGLTAQSFKCAGCQRSIGLSNGKAKVCNYSGWYYCSSCHVDDSFLIPARIVHNWDTSKYKVSKQAKEFLEYVYEEPLIDIQQENAMLYHHAEPLAAVLRLRQRLKSLRAYLFSCRAAVAEDLRRRIFPREYLLQQIHLYSLADLQQVIEGKLAPFLGKVIKFATSHVYSCSLCSQKGFICEICNNGEILYPFEDISTSRCESCGAVFHSECKEKSVPCPRCVRREL--QKKQKSFWQR 740
The following BLAST results are available for this feature:
BLAST of TCONS_00050211-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PKHM31.315e-6545.24Pleckstrin homology domain-containing family M mem... [more]
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