TCONS_00050214-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050214-protein
Unique NameTCONS_00050214-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length323

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050214-protein ID=TCONS_00050214-protein|Name=TCONS_00050214-protein|organism=Clytia hemisphaerica|type=polypeptide|length=323bp
MSKRKTLLSWLQSFAPGFLAALFYGLVSGSMSFLNKVVLTTFKFHYPDIV
MLAQVVLTSIVVELCRVTKMCDIPQWTWQRGKEFLIPSLCFALHTTLALA
ALAELSIPIYNVLRRMLPLASLLMARYVLKKTLSRKTYVAIAFTVVGTLM
AGFGDLQFKLYGYVDAILSVMAQSFYLTYVQKTGIEKGASALSVLHLNSI
NCILPLMMYTLWNGSLLQAARFEGFKDSSFNMSFMINVSMGCVLNYSLFL
CATMNSALTTSVVGVVKGVITSIIGFFTFGGVPPSALTLGGVSMNALGGA
LYTFAKYREKQILLQKAKTELPL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031814XLOC_031814Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050214TCONS_00050214Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004853Sugar_P_trans_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004853Sugar phosphate transporter domainPFAMPF03151TPTcoord: 21..302
e-value: 3.1E-17
score: 62.7
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 61..155

Blast
[Close]
BLAST of TCONS_00050214-protein vs. Swiss-Prot (Human)
Match: S35D3 (Solute carrier family 35 member D3 OS=Homo sapiens GN=SLC35D3 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.489e-38
Identity = 88/296 (29.73%), Postives = 156/296 (52.70%), Query Frame = 0 
Query:   17 GFLAALFYGLVSGSMSFLNKVVLTTFKFHYPDIVMLAQVVLTSIVVELCRVTKMCDIPQWTWQRGKEFLIPSLCFALHTTLALAALAELSIPIYNVLRRMLPLASLLMARYVLKK-TLSRKTYVAIAFTVVGTLMAGFGDLQFKLYGYVDAILSVMAQSFYLTYVQKTGIEKGASALSVLHLNSINCILPLMMYTLWNGSLLQAARFEGFKDSSFNMSFMINVSMGCVLNYSLFLCATMNSALTTSVVGVVKGVITSIIGFFTFGGVPPSALTLGGVSMNALGGALYTFAKYREKQ 311
            G   A+ +G+ SGS++ L K +++ ++F +  +V        ++ +EL R   +  +P +     + F   ++   L ++L L +L  LS+P+Y V +R LPL ++L+   VLK    S     A+  T  G  +AG GDL     GYV  +L+V+  + YL  +QK   +     L+  ++ +++    L++ +  +   + A  F G+KD +    F+  + +GC +N++   C  +NSA+TTS VGVVK + T  +G   F  V P++L + GV +N LG  +Y  AK+ E +
Sbjct:   11 GISVAIAHGVFSGSLNILLKFLISRYQFSFLTLVQCLTSSTAALSLELLRRLGLIAVPPFGLSLARSFAGVAVLSTLQSSLTLWSLRGLSLPMYVVFKRCLPLVTMLIGVLVLKNGAPSPGVLAAVLITTCGAALAGAGDLTGDPIGYVTGVLAVLVHAAYLVLIQKASADTEHGPLTAQYVIAVSATPLLVICSFASTDSIHAWTFPGWKDPAMVCIFVACILIGCAMNFTTLHCTYINSAVTTSFVGVVKSIATITVGMVAFSDVEPTSLFIAGVVVNTLGSIIYCVAKFMETR 306
The following BLAST results are available for this feature:
BLAST of TCONS_00050214-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S35D32.489e-3829.73Solute carrier family 35 member D3 OS=Homo sapiens... [more]
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