TCONS_00050243-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050243-protein
Unique NameTCONS_00050243-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length546

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050243-protein ID=TCONS_00050243-protein|Name=TCONS_00050243-protein|organism=Clytia hemisphaerica|type=polypeptide|length=546bp
MAAPPPPNTTLATKVSLTFSCKGLLDKDLTSKSDPIIQVMTYNHQKNWKE
VGRTEHIMNTHNPEFTKAIEIDYFFEEVQKLKIMVYDVDNATQNLGDDDF
LGRHECTLGQIVASRIYTKELTYRSGSSAGTVTVVAEEMGQSNNEVSLKF
QGQNLDKKDFLSKSDPYLEFAKDRGDGNFITVHRTNHIDNTLNPSWPEFK
LDTKTLCSGNYDLQIRVKCFDYDDDGGHDLIGEYYTTLSEMSSQQKKQWD
LINPKKQKKKKSYKNSGIIILDSIKVERMSTFLEYVMSGCQINFTVGVDF
TASNGNPTDPSSLHYFNPSGPNDYVQALTAVGEVCQDYDTDKQFPALGFG
AKIPPNWQVSFEFPLNFNAQNPYCQGIHNIVAAYQSCVRTIQLYGPTNVA
PIINHVTRFTQSVLAQHPPNTASNYFILLLLTDGVISDMADTVRAIVNAS
YLPISLIIVGVGNADFAQMDFLDCDEGKLRSNDGRDAMRDIVQFVPFRNF
KDAPPGQLAKEVLAEVPKQVTEFFKLSGIPPLQPQQQQPLNFQPTI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031827XLOC_031827Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050243TCONS_00050243Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR000008C2_dom
IPR010734Copine
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 291..496
e-value: 1.0E-15
score: 68.2
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 284..495
e-value: 3.1E-7
score: 30.0
IPR002035von Willebrand factor, type ASUPERFAMILY53300vWA-likecoord: 289..495
IPR000008C2 domainSMARTSM00239C2_3ccoord: 149..250
e-value: 3.6E-7
score: 39.8
coord: 13..120
e-value: 0.003
score: 26.8
IPR000008C2 domainPFAMPF00168C2coord: 151..249
e-value: 4.3E-10
score: 39.7
coord: 20..119
e-value: 4.1E-11
score: 43.0
IPR000008C2 domainGENE3D2.60.40.150coord: 10..139
e-value: 2.6E-15
score: 56.1
IPR000008C2 domainGENE3D2.60.40.150coord: 147..276
e-value: 3.3E-17
score: 62.3
IPR000008C2 domainPROSITEPS50004C2coord: 151..235
score: 9.302
IPR000008C2 domainPROSITEPS50004C2coord: 20..105
score: 9.198
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 151..261
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 19..125
IPR010734CopinePFAMPF07002Copinecoord: 312..530
e-value: 2.8E-80
score: 268.8
NoneNo IPR availableCDDcd04047C2B_Copinecoord: 145..253
e-value: 1.77789E-47
score: 160.809
NoneNo IPR availableCDDcd04048C2A_Copinecoord: 13..131
e-value: 1.04489E-49
score: 167.361

Blast
[Close]
BLAST of TCONS_00050243-protein vs. Swiss-Prot (Human)
Match: CPNE1 (Copine-1 OS=Homo sapiens GN=CPNE1 PE=1 SV=1)

HSP 1 Score: 567.77 bits (1462), Expect = 0.000e+0
Identity = 276/524 (52.67%), Postives = 369/524 (70.42%), Query Frame = 0 
Query:   13 TKVSLTFSCKGLLDKDLTSKSDPIIQVMTYNHQKNWKEVGRTEHIMNTHNPEFTKAIEIDYFFEEVQKLKIMVYDVDNATQNLGDDDFLGRHECTLGQIVASRIYTKELTYRSGSSAG--TVTVVAEEMGQSNNEVSLKFQGQNLDKKDFLSKSDPYLEFAKDRGDGNFITVHRTNHIDNTLNPSWPEFKLDTKTLCSGNYDLQIRVKCFDYDDDGGHDLIGEYYTTLSEMSSQQKKQWDLINPKKQKKKKSYKNSGIIILDSIKVERMSTFLEYVMSGCQINFTVGVDFTASNGNPTDPSSLHYFNPSGPNDYVQALTAVGEVCQDYDTDKQFPALGFGAKIPPNWQVSFEFPLNFNAQNPYCQGIHNIVAAYQSCVRTIQLYGPTNVAPIINHVTRFTQSVLAQHPPNTASNYFILLLLTDGVISDMADTVRAIVNASYLPISLIIVGVGNADFAQMDFLDCDEGKLRSNDGRDAMRDIVQFVPFRNFKDAPPGQLAKEVLAEVPKQVTEFFKLSGIPPLQP 534
            T V L+ SC  L+DKD+ SKSDP+  ++      +W E+GRTE + N  +PEF+K ++++Y FE VQKL+  +YD+DN T  L DDDFLG  EC+LGQIV+S++ T  L  + G  AG  T+TV A+E+ + N  V+++ + +NLDKKDFL KSDP+LEF + +GDG +  V+R+  I N LNP+W  F +  +  C GN    I+V+C DYD DG HDLIG ++T+L+++ +    +++ I+P+KQ+KKKSYKNSG I +   +VE   +FL+YVM GCQINFTVGVDFT SNG+P+ P SLHY +P+G N+Y+ AL +VG V QDYD+DK FPA GFGA++PP+WQVS EF LNFN  NPYC GI  IV AY+  +  ++LYGPTN APIINHV RF      Q    TAS YF+LLLLTDG ++D+  T  A+V AS LP+S+IIVGVG ADF  M+ LD D G L +  G+ A RDIVQFVP+R F++AP   LA+ VLAEVP Q+  +F+  G  PL+P
Sbjct:    6 TLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSSPEFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLMLKPGKPAGRGTITVSAQEL-KDNRVVTMEVEARNLDKKDFLGKSDPFLEFFR-QGDGKWHLVYRSEVIKNNLNPTWKRFSVPVQHFCGGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAV-PAEFECIHPEKQQKKKSYKNSGTIRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGSNGDPSSPDSLHYLSPTGVNEYLMALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPTNFAPIINHVARFAAQAAHQ---GTASQYFMLLLLTDGAVTDVEATREAVVRASNLPMSVIIVGVGGADFEAMEQLDADGGPLHTRSGQAAARDIVQFVPYRRFQNAPREALAQTVLAEVPTQLVSYFRAQGWAPLKP 523
The following BLAST results are available for this feature:
BLAST of TCONS_00050243-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CPNE10.000e+052.67Copine-1 OS=Homo sapiens GN=CPNE1 PE=1 SV=1[more]
back to top