TCONS_00050289-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00050289-protein
Unique Name	TCONS_00050289-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	311

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00050289-protein ID=TCONS_00050289-protein|Name=TCONS_00050289-protein|organism=Clytia hemisphaerica|type=polypeptide|length=311bp
MELNENSSINIKPILSDNLSKDMETTNACIGTIIDKRETKNLMTLFKDNF
PLDSSLQHLKRVGGSKSKGTLDFIICGEDDPEKDRILANENIPKYLKDIR
ISKVPSFCPLTRKQFEQAIEYWPCTFHENKQIKELVEGRNMTTEKRKQIA
KYFAILNKYENSEDCCFCLVVNPKTETILAIAPDCSHQGDPLQHSIMVAI
DMVAWLQGGGVYKNLQYMKSEAIDRAISVSKTSTSKTPDHLQNMDGYLCT
DFEVYSNAEPCVMCSMALLHSRVSKVFFSMKNSQSGGLTSVFRLHTEEGL
NHHFEAYCVDF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_031846	XLOC_031846	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00050289	TCONS_00050289	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002125	CMP_dCMP_dom
IPR016193	Cytidine_deaminase-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.140.10		coord: 142..309 e-value: 5.4E-25 score: 87.1
IPR002125	Cytidine and deoxycytidylate deaminase domain	PFAM	PF00383	dCMP_cyt_deam_1	coord: 168..279 e-value: 8.6E-6 score: 25.5
IPR002125	Cytidine and deoxycytidylate deaminase domain	PROSITE	PS51747	CYT_DCMP_DEAMINASES_2	coord: 173..307 score: 10.692
IPR016193	Cytidine deaminase-like	SUPERFAMILY	53927	Cytidine deaminase-like	coord: 121..214 coord: 247..307

Blast

[Close]

BLAST of TCONS_00050289-protein vs. Swiss-Prot (Human)
Match: ADAT3 (Probable inactive tRNA-specific adenosine deaminase-like protein 3 OS=Homo sapiens GN=ADAT3 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.350e-51
Identity = 104/318 (32.70%), Postives = 161/318 (50.63%), Query Frame = 0

Query:    5 ENSSINIKPILSDNLSKDMETTNACIGTIIDKRETKNLMTLFKDNFPLDSSLQHLKRVGGSKSKGT---LDFIICGEDDPEKDRILANENIPKYLKDIR------ISKVPSFCPLTRKQFEQAIEYWPCTFHENKQIKELVEGRNMTTEKRKQIAKYF-----AILNKYENSEDCCFCLVVNPKTETILAIAPDCSHQGDPLQHSIMVAIDMVAWLQGGGVYKNLQYMK-SEAIDRAISVSKTSTSKTPDHLQNMDGYLCTDFEVYSNAEPCVMCSMALLHSRVSKVFFSMKNSQSGGLTSVFRLHTEEGLNHHFEAY 307
            E +     P+LS+  S D+E   A    ++DKR+T  L+       PL +   HLKRV  S+  G+   L+ ++C        R LA E +P+   D R      +  VP+  PLTR QFE+A  +WP +FHE+KQ+   + GR  +T++R  +  +      A              +VV+P ++ +LA   DCS   +PL H++MV +D+VA  QG G Y    +   S A   A    +    +  D  ++   YLCT +++Y   EPC MC+MAL+H+R+ +VF+    S  G L + FR+H    LNH F+ +
Sbjct:   22 EPAPWQALPVLSEKQSGDVELVLAYAAPVLDKRQTSRLLKEVSALHPLPAQ-PHLKRVRPSRDAGSPHALEMLLCLAGPASGPRSLA-ELLPRPAVDPRGLGQPFLVPVPARPPLTRGQFEEARAHWPTSFHEDKQVTSALAGRLFSTQERAAMQSHMERAVWAARRAAARGLRAVGAVVVDPASDRVLATGHDCSCADNPLLHAVMVCVDLVARGQGRGTYDFRPFPACSFAPAAAPQAVRAGAVRKLDADEDGLPYLCTGYDLYVTREPCAMCAMALVHARILRVFYGAP-SPDGALGTRFRIHARPDLNHRFQVF 336

The following BLAST results are available for this feature:

BLAST of TCONS_00050289-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00050289-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ADAT3	2.350e-51	32.70	Probable inactive tRNA-specific adenosine deaminas...	[more]

You are here

TCONS_00050289-protein (polypeptide) - C. hemisphaerica