TCONS_00050293-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050293-protein
Unique NameTCONS_00050293-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length290

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050293-protein ID=TCONS_00050293-protein|Name=TCONS_00050293-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
MKNILLVNASIRASHTENYFNMWIQICFTLLLMYKTSSASPHKTSCWRQP
GWCSHSGSTFTFLDCDGDGLLDPICSDHNGAFGVIGLTKGCRSKWPTGKC
NNQKGRVCDRHKRWCSHSGATFFYQDCDNDGIPDPVCSDTRGSLGIIKSS
QQCKSTWPHAVCKAKGAARHTCKRANGWCSHSGSVYTMMDCDRDGIPDPV
CSDTNGNLGIIQSSKGCHSVWPKASCATMKGKVCARPKGWCSHAGSTFVF
KDCDGDGIPDPVCSDTRGSHGVIKSSQGCKDGWPHDVCRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031850XLOC_031850Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050293TCONS_00050293Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028974TSP_type-3_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028974TSP type-3 repeatGENE3D4.10.1080.10coord: 32..283
e-value: 2.0E-10
score: 40.0
NoneNo IPR availableSUPERFAMILY69318Integrin alpha N-terminal domaincoord: 49..270

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050293-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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