TCONS_00050330-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050330-protein
Unique NameTCONS_00050330-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length342

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050330-protein ID=TCONS_00050330-protein|Name=TCONS_00050330-protein|organism=Clytia hemisphaerica|type=polypeptide|length=342bp
MANREFLQKIDQFTSEDFCAESINCLQSLKNESKTDVKCRMELFVMYLQE
KLVSALQSYEPTRCFCIDRWLKDDTGGGISCVLQDGDVFEKAGVNISILS
ANLQENHRKIFESRGSMVKSDQTKFSARGVSCIIHPKNPFVPSMHFNFRY
FETSNNEDEIGHFWFGGGIDMTPTYLDQQDAEHFHQTIKTACDKHDKDYY
PRYKKLCDDSLFLEICDEYRGIGGFMFNELKDGNLEDLFDFVVTCGHAVL
PSYIPIVNKHLNDPYDEENIFWQRQRRGRYVLFNLLYDRGTRFGLLTPGI
RVENVLISMPLNAAWDIRYVPTPGSKEDDMLQFLKRKPKDWA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031863XLOC_031863Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050330TCONS_00050330Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001260Coprogen_oxidase_aer
Vocabulary: Molecular Function
TermDefinition
GO:0004109coproporphyrinogen oxidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006779porphyrin-containing compound biosynthetic process
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006779 porphyrin-containing compound biosynthetic process
molecular_function GO:0004109 coproporphyrinogen oxidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001260Coproporphyrinogen III oxidase, aerobicPRINTSPR00073COPRGNOXDASEcoord: 301..327
score: 43.43
coord: 127..151
score: 61.45
coord: 163..185
score: 61.26
coord: 272..299
score: 74.68
coord: 63..79
score: 37.43
coord: 200..229
score: 49.09
coord: 80..101
score: 60.33
IPR001260Coproporphyrinogen III oxidase, aerobicGENE3D3.40.1500.10coord: 26..342
e-value: 9.7E-110
score: 365.6
IPR001260Coproporphyrinogen III oxidase, aerobicPIRSFPIRSF000166Coproporphyri_oxcoord: 3..342
e-value: 1.4E-110
score: 367.1
IPR001260Coproporphyrinogen III oxidase, aerobicPFAMPF01218Coprogen_oxidascoord: 40..341
e-value: 1.4E-106
score: 355.4
IPR001260Coproporphyrinogen III oxidase, aerobicSUPERFAMILY102886Coproporphyrinogen III oxidasecoord: 33..341

Blast
[Close]
BLAST of TCONS_00050330-protein vs. Swiss-Prot (Human)
Match: HEM6 (Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial OS=Homo sapiens GN=CPOX PE=1 SV=3)

HSP 1 Score: 338.191 bits (866), Expect = 4.568e-114
Identity = 162/327 (49.54%), Postives = 219/327 (66.97%), Query Frame = 0 
Query:   17 DFCAESINCLQSLKNESKTDVKCRMELFVMYLQEKLVSALQSYEPTRCFCIDRWLKDDTGGGISCVLQDGDVFEKAGVNISILSANLQENHRKIFESRGSMVKSDQTK--FSARGVSCIIHPKNPFVPSMHFNFRYFETSNNEDEIGHFWFGGGIDMTPTYLDQQDAEHFHQTIKTACDKHDKDYYPRYKKLCDDSLFLEICDEYRGIGGFMFNELKDGNLEDLFDFVVTCGHAVLPSYIPIVNKHLNDPYDEENIFWQRQRRGRYVLFNLLYDRGTRFGLLTPGIRVENVLISMPLNAAWDIRYVPTPGSKEDDMLQFLKRKPKDW 341
             F A  +  L  L+     D+K +MEL ++  Q ++  AL   +    F +DRW + + GGGISCVLQDG VFEKAGV+IS++  NL E   K   SRG ++K+   K  F A GVS +IHPKNP  P++HFN+RYFE     D    +WFGGG D+TPTYL+Q+DA HFH+T+K ACD+H  D YP++KK CDD  F+    E RGIGG  F++L   + E++F FV +C  AV+PSYIP+V KH +D +  +   WQ+ RRGRYV FNLLYDRGT+FGL TPG R+E++L+S+PL A W+  + P+  SKE ++L+ L R P+DW
Sbjct:  129 SFMAPPVTDLGELRRRP-GDMKTKMELLILETQAQVCQALAQVDGGANFSVDRWERKEGGGGISCVLQDGCVFEKAGVSISVVHGNLSEEAAKQMRSRGKVLKTKDGKLPFCAMGVSSVIHPKNPHAPTIHFNYRYFEV-EEADGNKQWWFGGGCDLTPTYLNQEDAVHFHRTLKEACDQHGPDLYPKFKKWCDDYFFIAHRGERRGIGGIFFDDLDSPSKEEVFRFVQSCARAVVPSYIPLVKKHCDDSFTPQEKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWEYMHSPSENSKEAEILEVL-RHPRDW 452
The following BLAST results are available for this feature:
BLAST of TCONS_00050330-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HEM64.568e-11449.54Oxygen-dependent coproporphyrinogen-III oxidase, m... [more]
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