TCONS_00050408-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050408-protein
Unique NameTCONS_00050408-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length176

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050408-protein ID=TCONS_00050408-protein|Name=TCONS_00050408-protein|organism=Clytia hemisphaerica|type=polypeptide|length=176bp
ITIMSGKKSPYPTQQNSPYPTQPQQGAYPTHAPPPAGYPPQGGYPAQPPV
GGAYPPQPQGAAPPPYSGPPPAYAPPTYIQPNGPYQAYPGAQPYPVHGAQ
PGAYPPRGPVPAAAAAGSYDAAARFGAGASYNIPPPPPGCAPNAAQAAQQ
QGHNVVMNQQKSDFWNGTGHGGYTFY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031918XLOC_031918Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050408TCONS_00050408Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022730DAZ_assoc-2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022730DAZ associated protein 2PFAMPF11029DAZAP2coord: 41..176
e-value: 2.7E-17
score: 63.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..109

Blast
[Close]
BLAST of TCONS_00050408-protein vs. Swiss-Prot (Human)
Match: DAZP2 (DAZ-associated protein 2 OS=Homo sapiens GN=DAZAP2 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.819e-17
Identity = 69/162 (42.59%), Postives = 84/162 (51.85%), Query Frame = 0 
Query:   38 YPPQGGYPAQPPVGGAYPPQPQGAAPPPYSGPPPAYAP---PTYIQPNGPYQ-----AYPGAQPY----------PVHGAQPGAYPPRGPV----PAAAAAGSYDAAARFGAGASY-NIPPPPPGCAPNAAQAAQQQGHNVVMNQQKSDFWNGTGHGGYTFY 176
            YP Q  YP QPP    YP        PPY+  PPAY+    P+++ P          A+PGA  Y          P+    P AY P GP+          G YDA ARFGAGA+  NIPPPPPGC PNAAQ A  QG NV++ Q+K +F+ G   GGYT +
Sbjct:    7 YPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW 168
The following BLAST results are available for this feature:
BLAST of TCONS_00050408-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAZP27.819e-1742.59DAZ-associated protein 2 OS=Homo sapiens GN=DAZAP2... [more]
back to top