TCONS_00050432-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00050432-protein
Unique NameTCONS_00050432-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length793

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050432-protein ID=TCONS_00050432-protein|Name=TCONS_00050432-protein|organism=Clytia hemisphaerica|type=polypeptide|length=793bp
MAIPPTSATGSFDIPLTSTTGSVTIPPTSATVSVTIPQTSATGSVAIQPT
STTGSVAMPPTSTTSSVAIPLTSTTGSVAIPAFTLSLLRNGSLFTFYKKA
IPSASATGSVAITPTSTTGSVTIPPTSTTGSVAIPPTNATVSVTIPPTSA
TGSVAIPPTSTTGSVTILPTSAPFSVVIPPTSTTGSVAISLKSLLRSVAI
PPTSATGSVVILPTSTNGSVAIPPTSTTGSFDIPPTSTNGSVFISLRSLL
GSVAIPPTSATGSVAIPPTSTTGSVAIPPTSTTGSVAIPPSSATGSVAIP
LMSTTGSVAISLKSLLRSVAISPTSATGSVAIPPTSTTGSAMNFKIPSLT
KLFTIGPSFSHRNPDSVDEIPKKAYKTFPENVMQHAIQACINKELGIKEA
ARVYNLPKSTLHRRVTGLTQSSQPGRRTILTKREEARFTTGLNAMARWHM
PYGKTQLQLMVKRYLDKSGQNLLFLKDNLPGDGWARGFIRRNKIKQTKVK
SARFAVTNKDLKDYYKEVTDSLKDIPPSHIFNYGETNLTDLGKEVVLVRR
VASKRIEKCVEHSKQSYSIMYCGNAIGQYLPPMIVYKAETSCPEWEQNGV
EGAQYDATDTGWFDMVTFETWFHKVLLPNIEGNENSCIIGDNLPSHLSLE
VIEECERRNISFILLPPNATHLTQPLDVAVFKGLETKWRDVVNQWRKTAP
PGNIPKAEFPALVKKVHDQLEPDTLISGFRLCGIHPLDATPLLRKVPSSE
DVEQREKEIFGTVFMEQVFEVRDEMVATGMKKRSPPRKRKRKR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031935XLOC_031935Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050432TCONS_00050432Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007889HTH_Psq
IPR004875DDE_SF_endonuclease_dom
IPR011991WHTH_DNA-bd_dom
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007889DNA binding HTH domain, Psq-typePFAMPF05225HTH_psqcoord: 383..421
e-value: 5.3E-9
score: 35.6
IPR004875DDE superfamily endonuclease domainPFAMPF03184DDE_1coord: 565..727
e-value: 4.7E-22
score: 78.3
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 358..439
e-value: 4.3E-4
score: 19.6
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 374..423

Blast
[Close]
BLAST of TCONS_00050432-protein vs. Swiss-Prot (Human)
Match: CEL (Bile salt-activated lipase OS=Homo sapiens GN=CEL PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 1.397e-17
Identity = 61/242 (25.21%), Postives = 121/242 (50.00%), Query Frame = 0 
Query:   60 PTSTTSSVAIPLTSTTGSVAIP-AFTLSLLRNGSLFTFYKKAIPSASATGSVAITPTSTTGSVTIPPTSTTGSVAIPPTNATVSVTIPPTSATGSVAIPPTSTTGSVTILPTSAPFSVVIPPTSTTGSVAISLKSLLRSVAIPPTSATGSVVILPTSTNGSVAIPPTSTTGSFDIPPTSTNGSVFISLRSLLGSVAIPPTSATGSVAIPPTSTTGSVAIPPTSTTGSVAIPPSSATGSVAIP 300
            P +T +S  + +T   GS ++  +   + LR    +T    A+P+ +   +  + PT  + +  +PPT  + +  +PPT  + +  +PPT  +G+  +PPT  +G+  + PT    +  +PPT  +G+  +       +  +PPT  +G+  + PT  +G+  +PPT   G   +PPT  +G+  +      G+  + PT  + +  +PPT  +G+  +PPT  + +  +PP+  +    +P
Sbjct:  510 PYTTENSGYLEITKKMGSSSMKRSLRTNFLR---YWTLTYLALPTVTDQEATPVPPTGDSEATPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPVPPTGDSGAPPVPPTGDSGAPPVTPTGDSETAPVPPTGDSGAPPVPPTGDSEAAPVPPTDDSKEAQMP 748
The following BLAST results are available for this feature:
BLAST of TCONS_00050432-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CEL1.397e-1725.21Bile salt-activated lipase OS=Homo sapiens GN=CEL ... [more]
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