F-actin capping protein subunit alpha (polypeptide) - C. hemisphaerica

Overview
NameF-actin capping protein subunit alpha
Unique NameTCONS_00050802-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length286

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00050802-protein ID=TCONS_00050802-protein|Name=F-actin capping protein subunit alpha|organism=Clytia hemisphaerica|type=polypeptide|length=286bp
MGEYYEPIADGEKLRICSSFIKHAPPGEFNEVFNDVRVLLDNDQLLKEQA
SSAFSQYNMEQFTPCKLNSGDNVLITKHGALDNNTFYDPKTKQKFKYDHL
RKEATDLEAHDTGDASESWRSAVESAVANYVKDHYPHGVLTVYGKSSGSD
ITITACVEDHQFQPQNFWNGRWRSEWSVTFNSSGGNAELKGLLKLQVHYY
EDGNVQLVSHKDVTKEINVSDANSLGRDLAKHIDDSETEYQRAIGENYQM
MSDTTFKALRRQLPITRTKIDWNKIVSYRIGAELKS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032183XLOC_032183Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00050802TCONS_00050802Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002189CapZ_alpha
IPR017865F-actin_cap_asu_CS
Vocabulary: Cellular Component
TermDefinition
GO:0008290F-actin capping protein complex
Vocabulary: Biological Process
TermDefinition
GO:0051016barbed-end actin filament capping
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051016 barbed-end actin filament capping
cellular_component GO:0008290 F-actin capping protein complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002189F-actin-capping protein subunit alphaPRINTSPR00191FACTINCAPAcoord: 162..176
score: 76.0
coord: 253..272
score: 84.5
coord: 196..209
score: 86.43
IPR002189F-actin-capping protein subunit alphaPFAMPF01267F-actin_cap_Acoord: 17..284
e-value: 1.3E-100
score: 336.1
IPR017865F-actin capping protein, alpha subunit, conserved sitePROSITEPS00749F_ACTIN_CAPPING_A_2coord: 257..267
IPR017865F-actin capping protein, alpha subunit, conserved sitePROSITEPS00748F_ACTIN_CAPPING_A_1coord: 197..205
NoneNo IPR availableSUPERFAMILY90096Subunits of heterodimeric actin filament capping protein Capzcoord: 11..281

Blast
[Close]
BLAST of F-actin capping protein subunit alpha vs. Swiss-Prot (Human)
Match: CAZA2 (F-actin-capping protein subunit alpha-2 OS=Homo sapiens GN=CAPZA2 PE=1 SV=3)

HSP 1 Score: 348.206 bits (892), Expect = 2.611e-121
Identity = 171/287 (59.58%), Postives = 215/287 (74.91%), Query Frame = 0 
Query:    1 MGEYYEPIADGEKLRICSSFIKHAPPGEFNEVFNDVRVLLDNDQLLKEQASSAFSQYNMEQFTPCKLNS-GDNVLITKHGALDNNTFYDPKTKQKFKYDHLRKEATDLEAHDTGDASESWRSAVESAVANYVKDHYPHGVLTVYGKSSGSDITITACVEDHQFQPQNFWNGRWRSEWSVTFNSSGGNAELKGLLKLQVHYYEDGNVQLVSHKDVTKEINVSDANSLGRDLAKHIDDSETEYQRAIGENYQMMSDTTFKALRRQLPITRTKIDWNKIVSYRIGAELKS 286
            M +  E ++D EK+RI + FI HAPPGEFNEVFNDVR+LL+ND LL+E A+ AF+QYN++QFTP K+    D VLIT+HG L N  F DPK +  FK+DHLRKEATD    +  +A ESWR++VE+A+  YVK+HYP+GV TVYGK      TI AC+E HQFQ +NFWNGRWRSEW  T   S    ++ G+LK+QVHYYEDGNVQLVSHKD+   + VS+     ++  K ++ +E EYQ AI ENYQ MSDTTFKALRRQLP+TRTKIDWNKI+SY+IG E+++
Sbjct:    1 MADLEEQLSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLDQFTPVKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRKEATDPRPCEVENAVESWRTSVETALRAYVKEHYPNGVCTVYGKKIDGQQTIIACIESHQFQAKNFWNGRWRSEWKFTITPS--TTQVVGILKIQVHYYEDGNVQLVSHKDIQDSLTVSNEVQTAKEFIKIVEAAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEMQN 285
The following BLAST results are available for this feature:
BLAST of F-actin capping protein subunit alpha vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAZA22.611e-12159.58F-actin-capping protein subunit alpha-2 OS=Homo sa... [more]
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