TCONS_00050802 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050802
Unique NameTCONS_00050802
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1671

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050802 ID=TCONS_00050802|Name=TCONS_00050802|organism=Clytia hemisphaerica|type=transcript|length=1671bp
CCCCCATAAAAAGGTGGTCGGCAACTCGGCTATAATATTCGCTAGTCTAG
CTCCTACACACCCTGGGTCGACCGAAGGCGACCATCTTGTTTTGATACAG
AAACAACAGTCAACGGTCAACGAAGGCTGACATCCTCCTTTCTTTTTCTG
GTAAAAACTCACTATAACCATGGGTGAATACTATGAACCAATCGCTGATG
GAGAAAAGcTGAGGATATGTTCCAGTTTTATCAAGCATGCACCTCCAGGA
GAATTTAATGAAGTTTTTAATGATGTTCGAGTTTTATTGGACAATGATCA
ACTACTTAAAGAACAAGCTTCTAGtGCTTTTTCACAGTACAACATGGAAC
AATTCACACCTTGTAAATTGAATAGTGGTGACAACGTACTGATCACCAAA
CACGGAGCTTTGGACAACAATACATTCTATGATCCAAAAACCAAACAAAA
GTTCAAATATGACCATTTGAGAAAGGAAGCCACTGATTTAGAAGCTCACG
ACACAGGAGATGCATCAGAATCGTGGAGAAGTGCTGTTGAAAGTGCTGTC
GCAAATTATGTCAAAGATCATTATCCACATGGTGTTTTAACAGTTTATGG
TAAATCTAGTGGTTCTGACATCACCATCACAGCATGCGTGGAAGACCATC
AATTTCAACCACAAAACTTCTGGAATGGTAGATGGCGATCAGAATGGTCG
GTGACTTTCAACTCAAGTGGTGGTAATGCAGAACTAAAAGGATTGTTAAA
ACTACAGGTACATTATTATGAAGATGGTAATGTTCAATTGGTTTCACATA
AAGATGTCACCAAAGAAATCAACGTCTCTGATGCAAATTCACTGGGAAGA
GATTTAGCAAAACATATAGACGATTCAGAAACTGAATACCAGAGAGCCAT
TGGTGAAAACTACCAAATGATGTCTGACACAACATTCAAAGCACTCAGGA
GACAACTACCCATCACAAGAACCAAGATTGATTGGAACAAGATTGTTTCA
TACCGAATTGGTGCTGAATTGAAAAGCTAAGGAAAGGTGTTGAATACTTG
TAGGTttatcaagaaaagaaaaaccacCCACTTCCAAATTTGAAGATTAA
TTTTTGTAGAGAAGTATTAGAAATAAAAGTAAAaccaaacattttgaaaa
ggaTAAGTTTTTAAATGCCCCAGAAAAATGCTTCTAGGGTATAGATTCTG
TTTTAGGTGttatttttgggatttttctattaaaaaaagcttaatattat
tataattaaaaaaattttccttttgaattttagtgattttttaaataatt
tttttgttatattatTTTTGTCAGTCATGGTATATAGTTAGTTCTTCAAT
ACCATTTGCGTTCACTCACGATTCTTCTACTGTTTTCAAGATATTATTTC
AATATACAATTTTTGACCCTCTACATTGGCTTCTTCAGAAACTTGGCTTC
AACTAAGATTTGTTGTAAATTGTTGATTTTATATTTCCAGCTGTATTGTT
CTCAAAAATGCTTAGAACATTTTCACCCATTACCaataattttttatgtt
ttttctttttgtttataatttaaTTATTTGTGAAGATGTTCTTAAATAAT
AAGATTTAGACCAGTTTTTTACCAGTAATTTTAAATTTGCTCTGCATCCA
GATTGCTGTAATTCATCTTTG
Run BLAST on NCBI

protein sequence of F-actin capping protein subunit alpha

>TCONS_00050802-protein ID=TCONS_00050802-protein|Name=F-actin capping protein subunit alpha|organism=Clytia hemisphaerica|type=polypeptide|length=286bp
MGEYYEPIADGEKLRICSSFIKHAPPGEFNEVFNDVRVLLDNDQLLKEQA
SSAFSQYNMEQFTPCKLNSGDNVLITKHGALDNNTFYDPKTKQKFKYDHL
RKEATDLEAHDTGDASESWRSAVESAVANYVKDHYPHGVLTVYGKSSGSD
ITITACVEDHQFQPQNFWNGRWRSEWSVTFNSSGGNAELKGLLKLQVHYY
EDGNVQLVSHKDVTKEINVSDANSLGRDLAKHIDDSETEYQRAIGENYQM
MSDTTFKALRRQLPITRTKIDWNKIVSYRIGAELKS
Run BLAST on NCBI

transcript from alignment at scaffold_189:108336..120409+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050802 ID=TCONS_00050802|Name=TCONS_00050802|organism=Clytia hemisphaerica|type=transcript|length=12074bp|location=Sequence derived from alignment at scaffold_189:108336..120409+ (Clytia hemisphaerica)
CCCCCATAAAAAGGTGGTCGGCAACTCGGCTATAATATTCGCTAGTCTAG
CTCCTACACACCCTGGGTCGACCGAAGGCGACCATCTTGTTTTGATACAG
AAACAACAGTCAACGGTCAACGAAGGCTGACATCCTCCTTTCTTTTTCTG
GTAAAAACTCACTATAACCATGGGTGAATACTATGAACCAATCGCTGATG
GAGAAAAGGTAATTGATTTAAACTGACTAGTAGAagctttaaattttatt
ttatcctttaaatATCTCCTGGCAGCAAAACCAGCAGACCAGgcttagtt
aatcgatataatcgataatcttaagtaatcgataaataatcaatAAGTAA
TCGATGGCCTAGATATCGACTAACCGacagaatcgataggtaatcagacc
ttcaaaaaatcttgagtatcgatcagcgATGGATTTTTTCCAAGCTATCG
ATTATATACTTATTATAgatcacatatcgactacatacaagattatcgat
tacttatcaatcatgtatcgattgttaacaatcattgattacttatcgtt
catgcattgattacttatcaattatttacttatcttcgatcacgtattgt
tatcgattatatcacgtgcgtttgcgtagggtaaaatggcgaaatgcgaa
aatattttggcaaaatttttttgaaaaatgaccctacaagatttgactat
atctttttatttcatgaagagattactttcaaataaaaaatatatttggg
gtGGGGGTAAAATGGGGCTATCTTCAAATCATGCTGTGCTAGAGTTTTTT
TGATGTGTTTCTACTCGAATAACaataatctgaaaatttttttcaatttc
atgcatttttcagGAATTGCCGGACCAAAAATTGCCAATTTTGGTCCTAA
AAccccaaaaatagcaatttttgtcattttactGGTATTTATCCTTACGT
TCATGATCCCACATGAAGCCAATTAGTATTCAAAGTTGTTTAAATATAAT
TTAGAAGTACTTAAAGATATAATTTTGGTGCTTTCAACACCTTTTGGGAC
CAAAAATTaggcaaatttcagccaaaaactcaaaaaaaggtaatttttta
tcaattttgccATGTAAAAGTTGCTTAAATGCATGTTATAGGCCTAAAAC
TTGCCAttcatttcaaagaaataaTTGATGCATCACAGGGAGTCAAGATT
AGGGGCCTCTgggtatagaatgggctttaGAGGCTTAATTAAGCTAAATA
AACAAGAAAATCAACTGTATTTtctataaaaatgtaaaatataaagTTCA
AAGCTGATGCcgatttaaatattttcaaatgaatttttgattcattttgc
taaaaattattAAGATTTAATATATATATTATTTAAATCTATAATAATTC
TGATTGAGTCCATCACATTCGTAAAGTGTGTTGATCAAACGCAAACAATC
CTGTTTTGCTGTTCATCAAATGAAAAGTCTTTCTGGAATCTGCAGCCATA
TCCCGATCACCTTCTATTAAGAGTAGATCGTCAaatggcaaagtcaaaaa
attcaaagtgtagtatttttttgtgaaaattttaatctattttaagacat
tttgcgcaatttttaacctcctaggtcaaaaatccagcattccccaaAGG
GGTCTTTGATTTgcactaaagcgaaaaatgagtaaaaatgacattttttt
gcccattttaagactataaaaggccaggaaagggtcaaaatggtttctaa
atggtgtcttgtactaatattcaacacaaaaagagtAAAGaaaccccagc
gagatcgctggatgtttcaatttcaggctaaaaaggctgattttctccga
ctctgggtagcaaaatgcacgaaagcagcatttttgaggacccacaactt
ttaaactttttaaggtacaccAGGCTGCATCGTTTGAGGCGTGTgatagc
acgcgcacacctccacacacacctaaaatcttTGAGGAGAGTGATTAATC
ACACGccataaatttggattttactacttaaagttatgcatagcactcct
tatcacacgcctaaagtactttttaggAGTGCGATTGACCACACTcctgg
aattttcaaatgacaaagcctggactacacacttgaaattttcagcaatg
aaacatttcagagaaagctccaggaaaaatcaatcttgagttctcaaaaa
tttcctataaaatccataatggcgccctagaaattaagttttcatgctaa
atgtcaatatttcaagctaaaatttggttttcttgggctaaaatctcaaa
aatgatttcaaatgatgtcctgaaatctttggctcttcgaagtattctga
aaatactctggaagaatcaaaatggtttgggtcagagaTTTGCCCAATCT
GCCATTAtagtattgcatttcccactgaaacgcgatatttagagttaaag
tctaattttctcaggctaaaatctcaaaaatggtttcaaatggtgtcctg
aaattttttggtgttgaaagtattctgaaaatactctgggagaatcaaat
tggtttgggtcagaaatttgccctagtctgccattatggcattgcatttc
caactaaaacgcgatatttagagttaaagtctgattttctcagggtaaaa
tctcaaaaatggtttcaaatggtatcctgaaatcttttggtgttgaaagt
ctTCTGGgtatactctgggagaaccaaaatggtttgggttagaaagttgc
caaagtccgccattatggaattgcatttcccactaaaacgcaatatttag
agctaaactctaattttctcgggctaaaatctcaaaagtggcttcaaata
gggtcctgaaatctttcggtgttgaaagtattctggaaataatctgggaa
aaccaaaatggtttgggtcagaaatttgccaaagtctgccattatggaat
tgtatttcattctaaaacacaatgttttgagtaagcttgagtgttcttcc
taaagaaataaataaaaaagcccattctatacccAGGTCTACCCTGGTCT
TGACTCCTTGTGATGCATTAATGATTTCCTTGAAATGAATGGCAGTTTTC
AGGCCTATAACGTGCATTTAAGCAACTTTTATAtaacaaaattgacaaaa
aattaccttttttgagtttttggcccaaatttgcctaatttTTGGTCCAA
TAAGGAGTTGAAAGCACCCAAATTATATCTTAAGTACTTCTAAATTATAT
TCAGACAACTTTGAATACTAAATGGCTTCATGTGGGATCATAAACAAGGA
GAAATATCAGTAAAATGACGAAAATTGCCATTTTGGGGGTTTTGGGACCA
AAATCGGCAGTTTTTGGTCCGGCAATTCctgaaaaatgcatgaaattgaa
attttttttcagattattgttatttgggtagaaaaacatcaaaaaaactc
TAGCATAGCATGATTTGAAGATAGCCCcttaaaaatgttgttttaCCCCT
ACCCCTACGAACAAACAACCAATATAcaacctttttgttttattggtgGT
GTAGATGGCAGCATACCATCTACCAGTGACTTCACTCTCTTTTGTTGGCG
ATGCCAGGCCTTTCCAGCAATTCTTGAGTTTTTGGATATcactttcatca
tcagtttcATCTTCGGACATTTCGCTCTCTTCAGATTCAAATTCCTCCCC
TTCCTGATGACGAATCCTCCTCAAACAATCGTTTAGAGATTGAATGTTGT
TTGGGTGGTAATGTCATCAGTGGTTTGATTCCATTAACTTTACAGCTTGC
TTTGCTGCAAACTGAACAATAATGCAATAGTGCAATACTGGGTACTGCTT
TAATCCTAAAGCCAAGCATTTTTGTTGCAAACAGGTACATTGAGTTTTGC
ATTTCATGAATGTTTCCCTGATCTACTCTCTCTTCTttgcttcttctttt
tcagtttccTTCTTCAGTTTCTCATCCCTGATTTctttgaccttggttgc
tacaCCTTTAGCCCTTGTCAAGCCGTGTACCTAAGTCACCCTTTTAGTGG
TGGTTGCTTTCTTTTCTTCGTGTGGCTTGACCCTTTTTAttgtcagaagg
ccaggaattTCCTCCAGTTGGATGCTTTTTTCTGCCATCTCCCTTATCAG
GGACTGAGCCTGGCCAAATTTAGCCTTCCAATAATCACGAgaaccttttc
ttttgtcaGAAGGAGACATGATGAGTCTGGAGTTGATGTAGATGTTGATG
GAGGGATTTCTTCTTGTATACATCAGAATCAATTCCAATGACTTTTTGGA
AAAGAATAGAataaagagctcataaaaaagtagctgttttttttcgtttt
ccCATTATTTATTCAGAGAGTTTatttcttttcggctgttttgtttataA
CTTTCTCATACCGCTTACCTAAATGTTagccaatttttatttaaagtcgt
ccTAAAGCGTTATAACACCCCTCTCTCATTGCATTCTCGATAAATTTTTT
CGATCCAAAGAGGGGTTCGCCATttccaaactcctttccaacctcgagtt
atcgcattctttttgttttgtttttgtcgcatcagctgaaaatggctaaa
aattcagccaaatttaaaagtccttttcaagccttataaaccctcccatc
tcattccccataaaattcccgatctaaagaggggtcaacgacctctcaAC
TCTTCTTCAAACTTGAAGTTTCTCCCAAACCCATGACGTCAATGGGTCCC
TTTACCCGtaatgttatcaacggtcaattcgcgaattttggaattttgaa
attttgaaattttgaaaaataccttatgccccaagggtcccaaaaaataa
aaaaacgtcaattttttccaaggggaAGTGggttttaaatttgcgaaaga
ttgacactgcaacgacttcgtcttaaaaaaagctaattttcacgaaattt
tcaaagttgaaacattccagaggctaaacacAGAGGAGTAGCGacgaaaa
aaatcgtgaaaaataaaaactgaatttcattttttgggcCTGCATattat
tgtaaattttgtaaattttgcttacacgcatgcgtttgccaaaagagtcg
cactccacTCGCttacgctcgctccgtgcgcaataatgagttttaaagct
agtttgttttgctacaaCCGGGCCTTTGAATAATCTGaagctactgaagt
tgagcccagtgcgctgcgcacgttcgactatgcAGGACTAATATACATCA
CTCAAATATTGGTTGGTTATTTCTTTAAatcttctttaatttttttattt
ctggtCCATTTTAATCGATAACCAACCGCCGTCTTCATCTTTCTATATGT
TTTTGATGTAATTATTACTAACAAATAGATTATACAATTGTTAAATTCTT
TCTTGCTGCACTTTTGAGATGGAACTCTTAACATCTTTTAAAGGTTGATG
AAGAGATTGGtaacattatttttttcagcTGAGGATATGTTCCAGTTTTA
TCAAGCATGCACCTCCAGGAGAATTTAATGAAGTTTTTAATGGTAAGATA
ATTAATTATAGCAGTAGTTATATGCTAAGCTGCTAAGGAGGGTTTTTTGA
ATCACATTACATTCAAAACCAACCTGAATGATTTAAACCACTGATGATAT
CTCCAGATGATAATGGGTAAAACCGTACTGTACCTTAGACTGCACGCATC
CcctttgatatgttttgatataggggatgctaaTTGTGTATGAAATTCCC
ATCAATAATCCAATAATTGTTTTAACCTAGGGCCATTCAAATTTTggatt
aaattcaatgaaatttaaagatcaCTCATATAAAACATACTAACCAAGCT
AATCAAAAGCACAAAGACAGGTGTAAATCTTGGACGGTAATTTTATACAT
GAcgcgcatcccctatatcaaaacatatcagagggtgTACCTTAGCTAGC
ATTTAAGAGGAAAGACCAGTCTACAATCATGTATATATACATGTTACTTT
TCATATAATACAACCCAAGTTTATAGGGGTGTAATGCTCTCCCCCTGTAG
TAATTGTTTGCTACATGTCATCCATTTATTTTTTGGTTACAGACCTTCCA
TTTATTGTAGAAAGAAGAATTAGAGAAACTGAAATTGTGACttgaatttt
catttaaatAAAATACTCATCTTAATCTTTTCTCTTATAGATGTTCGAGT
TTTATTGGACAATGATCAACTACTTAAAGAACAAGCTTCTAGGTTTGAGA
AAATATTTCTAATGATTTATTAATTTTCTGTCTGATATTGATTATAAGTG
CAGAGTTTCTATTCAGGTGCTATTTCCATCccttttctttgaaatgaagg
aTTATTGGTTAGATTTGTTCTATAggttttaaacttaaaaaaaaggtATA
TATTTTTTGCCTTTCAATCGTTGTTATAGATAAATTGATTCTCTTATTCT
GTTAATCCGTGTGAACTAATTGTTACCTTTTATCAAAATGAGTCATTTCT
TTGGAATAAGGGCCAATTAACTAAACTTTGGCAAATTCGTTGTAAATTCT
ACGATTCTTTTGGTTACTTCGACTAGCTTATAGTCTGAATCTGTAAGAAA
TTCAATTCAAGTGGGGGgtgtacggtatttcggaatcgCGGAAATTGACC
CGTTTTTCttcggaaattttggaaatcaagtaaaattccttcggtatttt
ggAATGCTTAAAtcgtttcggtatcggaaatccatgaatttttgcttcag
aatttCTTCAGAATTTCTTCAGAATTTCTTCAGAACTTCAGTATTTATTA
CGGAATCTcggaaatttttgcaaaattattcggtatttcggaaatcgcaa
accccgtacgccccccccccattCAACGATTTGAGACATTTGACGTCAAG
CTTTCCTTGTAGAAGAAGGAGAAAAACAAGCCTACTCTAACCTTGTCCTA
AGGACAAAGATCACAGAGCTTTCCTTGTAGACTCGGTTTTTTACGCTTTA
AGGGATGGCAGGTGTATAGAAATTTTGCTGAACAACAAAGAAACAATGTT
TGAGAATTTGAATTGTCATGGGATAAATGATCAATTATCATGGGATGATT
GATCAATTATCACATGCCAGTTTTGAATTCTTACAACTGGCGTTTGAAAA
TTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNtatctttatttattttttagacctgat
gatgatacaaaagtatcgaaatatattgtcaagtaaaataaaaataaaat
gaagttacATCGTTGATATTTCACTtctggtttttcttttttgcagtGCT
TTTTCACAGTACAACATGGAACAATTCACACCTTGTAAATTGAATAGTGG
TGACAACGTACTGATCACCAAACACGGAGCTTTGGACAACAATACATTCT
ATGATCCAAAAACCAAACAAAAGTTCAAATATGACCATTTGAGAAAGGTA
AGTTCGTTGATTTGTTGTTAATTATTTGTGCCCGGTAAGACAATTCATGC
CAGACAGGCCAATACATTCCATTGCACATACATTTTCCAGCACACAGGCA
AGAAGGTAAGATATTTAATGCTAAATATTATTGTATGTTATAAATTTAAA
AACCAAATATCAAAACCAGTAATGCAATGTTCCGTGTTTTGATGGTTGCA
AGTGTCATTATGACACACACCCTTTTTCACAGTAAGGACTGCCAGTTGAT
AGTGCCAAGGACATCAGATTCTATTAATGAAACCTAGTTTTAATTCGACT
AAGTCAAAAacccatggcgttctaaagaCTTGAAAATTGAGCCCTATAAA
ATCGAAGTTGCTGCACACTTGCCAGACCTGTAGATTTGGAACGCCATTGA
ACAACTCTAACAAATCCATCActgttttttctcaatttttttgcaaaatt
gatttatttgaaAGCATTGtcttgaaattttatattttctgcTTTTTTTC
CTTTAGGAAGCCACTGATTTAGAAGCTCACGACACAGGAGATGCATCAGA
ATCGTGGAGAAGTGCTGTTGAAAGTGCTGTCGCAAATTATGTCAAAGATC
ATTATCCACATGGTGTTTTAACAGTAAGaaaattcaccaaaactatCGAA
ATCCTCACTAGACCTTGCTACAGAAATTcatttatgaaaatgaaaatcat
agCACTATTCTCTaggaagttgattttcttcctCTTTATTTCACATCTtc
tcttttttctgttttgatagTATTCCACTCAGGAACTTTTTAACGAGAAA
TAAAACAGCTACCTAatttgaattctatcaaaagttatagccttttTTAT
CTTCGCGACAGATTATATtgggacagactttagtatatAGTAGGTCTATT
GACTTTTACGGAGTTTTCAAGTCTTTGCCCTCTTTCTTGCACATCAGCTG
TTCAAAATTGGTATCAGTGCAAATATGTTTTGATTTAGAAATAAATTTGA
GGGTAAACGTTCCATTTTGAAATGTTACAGGTTTATGGTAAATCTAGTGG
TTCTGACATCACCATCACAGCATGCGTGGAAGACCATCAATTTCAACCAC
AAAACTTCTGGTATGTTACTGAAAAATCTATACCGTTATTATTTCTCTTT
CTTTCCGCACACTATATAAAGTAACAagccttttttattttacttgatCG
GAACACTGAAAATACTTTAAAATTCAATACAAACCTTGATCAATgtttta
aataatataaaattttataaaatttttatttgaaaaaacgCTAGCGCCCT
ACTTAACGGGATTAATGtttgcgggaattaaatttAGCGGTTGAGCTCAT
CATCAAGATTTCACTGGGACTTTGTGATGGGTAGCTGTTTTTCGCGGATA
ACTCTATTGTGAAATAATTTTGTgctatttttgttattttactaCGTTAA
ACTATGCATGTTTGTTGTGAAAAACTCGTTAGTAACGCTTCTCTAATGGC
GGTAAAGATGTTAAAACTGgtctttgaacatttttttggaattaaTTCAT
GATGGAaacgcgaaatccgcgaaattttgatccccgcgaaaattaatccc
atttAAGTATtatgtttttagtttttttgacctttttaatTTTGTAGGAA
TGGTAGATGGCGATCAGAATGGTCGGTGACTTTCAACTCAAGTGGTGGTA
ATGCAGAACTAAAAGGATTGTTAAAACTACAGGTACTCATCACTCAAAGT
CTCTCTTCATCAGCTAAATTAGGTCTAGTCATAAATTTCCTCGTTTAAAT
CACTTTTTTTTCACGAAAGGGTAatataaaaaaccttttttcctAAACAT
TGATGCTGAGATCAATGATTTCACTGCTGATGGTAGTGATAATGGTCGAA
acgtttgaaataattttttatgttttaaaaaaaacatgaagcTTCTgtct
tttaagtttttttttgggATCAATCTTTGTTAATTATTTTCCGAATTATG
ACCCTGAAATACTTGAGAACCGTAAACCTTTATTTAACCAACTTCTTCAC
TTTTTCTCAGGTACATTATTATGAAGATGGTAATGTTCAATTGGTTTCAC
ATAAAGATGTCACCAAAGAAATCAACGTCTCTGTAAGAATTTTTATCATT
TACATTGGCTATTTTTACGTTGACTATTAGGGAAGGACGGTTTCATCAGT
CTTAATAGAAAAAATAGCGGAATTTCGGCGTTGCCGCTATTAATGagcct
ttctttgtttttctgacAGGCTTCATATACtgtaaacaatttttgaagtg
tTGTTTATGCTTTCCTCTGTAGGATTTTTAATCAGGATTTTCAGTCAGGC
AGTTGAGCATAGAAGCTTGATCAAAATTTGTATGCTTCGTCTTTGCTCAT
GGATATGTTTTTGATGCTTTCTAGGATGCAAATTCACTGGGAAGAGATTT
AGCAAAACATATAGACGATTCAGAAACTGAATACCAGGTaaagtttcaat
attttttttaatatcgGTTTTTACATTGTTGAATACACATACGTTGGTAC
TTTCAATACATGTGATTATATTATTGAGCTGCGTAACCTTTTAATTATAA
ATTAATTATAAACGAGCCCCATTTATTGCTGTCCATCTATGTCTTATCGT
TCTCTCTCATGTTTGCCTGATCTCTGAttctttgtcattttttatcccAT
CTAACTCTCACCCTTATTATACATTTATCTGTCATCAAAAGAACCAAGca
atatttttcattgtttactctttcaaagcgggctacacggctttttgtgC
AAACGCAATTGGTTATTtttgcatgacgacgggcctacactgccAGATTT
ACctgtcgttaggaaaattcattgtgacgtcactttttcaaaagaaaatg
actcattttttatttctgacttCAGAAattataacttttttttatctctt
ttcgcttgtttttttcgctttatttcgctatttttcctggataaagcgct
aaaaatcaatcgaagctgaaggaaacggttaacaaataaaataataaccg
tttttttcgggctgtactgaaaatattgccctcggtcaacgcaacaacct
cgcaagctcggtcgttacttgacctcgggcaatatttctcagtacagccc
tcactaaccagTCGTTATTGtattaatgtttattttttgaaaatgaacaa
tgaagagaatttttttaaatgttttttctattttgacatTTACAGAGAGC
CATTGGTGAAAACTACCAAATGATGTCTGACACAACATTCAAAGCACTCA
GGAGACAACTACCCATCACAAGAACCAAGATTGATTGGAACAAGATTGTT
TCATACCGAATTGGTGCTGAATTGAAAAGCTAAGGAAAGGTGTTGAATAC
TTGTAGGTttatcaagaaaagaaaaaccacCCACTTCCAAATTTGAAGAT
TAATTTTTGTAGAGAAGTATTAGAAATAAAAGTAAAaccaaacattttga
aaaggaTAAGTTTTTAAATGCCCCAGAAAAATGCTTCTAGGGTATAGATT
CTGTTTTAGGTGttatttttgggatttttctattaaaaaaagcttaatat
tattataattaaaaaaattttccttttgaattttagtgattttttaaata
atttttttgttatattatTTTTGTCAGTCATGGTATATAGTTAGTTCTTC
AATACCATTTGCGTTCACTCACGATTCTTCTACTGTTTTCAAGATATTAT
TTCAATATACAATTTTTGACCCTCTACATTGGCTTCTTCAGAAACTTGGC
TTCAACTAAGATTTGTTGTAAATTGTTGATTTTATATTTCCAGCTGTATT
GTTCTCAAAAATGCTTAGAACATTTTCACCCATTACCaataattttttat
gttttttctttttgtttataatttaaTTATTTGTGAAGATGTTCTTAAAT
AATAAGATTTAGACCAGTTTTTTACCAGTAATTTTAAATTTGCTCTGCAT
CCAGATTGCTGTAATTCATCTTTG

Coding sequence (CDS) from alignment at scaffold_189:108336..120409+

>TCONS_00050802 ID=TCONS_00050802|Name=TCONS_00050802|organism=Clytia hemisphaerica|type=CDS|length=8610bp|location=Sequence derived from alignment at scaffold_189:108336..120409+ (Clytia hemisphaerica)
ATGGGTGAATACTATGAACCAATCGCTGATGGAGAAAAGcTGAGGATATG
TTCCAGTTTTATCAAGCATGCACCTCCAGGAGAATTTAATGAAGTTTTTA
ATGATGTTCGAGTTTTATTGGACAATGATCAACTACTTAAAGAACAAGCT
TCTAGtGCTTTTTCACAGTACAACATGGAACAATTCACACCTTGTAAATT
GAATAGTGGTGACAACGTACTGATCACCAAACACGGAGCTTTGGACAACA
ATACATTCTATGATCCAAAAACCAAACAAAAGTTCAAATATGACCATTTG
AGAAAGGAAGCCACTGATTTAGAAGCTCACGACACAGGAGATGCATCAGA
ATCGTGGAGAAGTGCTGTTGAAAGTGCTGTCGCAAATTATGTCAAAGATC
ATTATCCACATGGTGTTTTAACAGTTTATGGTAAATCTAGTGGTTCTGAC
ATCACCATCACAGCATGCGTGGAAGACCATCAATTTCAACCACAAAACTT
CTGGAATGGTAGATGGCGATCAGAATGGTCGGTGACTTTCAACTCAAGTG
GTGGTAATGCAGAACTAAAAGGATTGTTAAAACTACAGGTACATTATTAT
GAAGATGGTAATGTTCAATTGGTTTCACATAAAGATGTCACCAAAGAAAT
CAACGTCTCTGATGCAAATTCACTGGGAAGAGATTTAGCAAAACATATAG
ACGATTCAGAAACTGAATACCAGAGAGCCATTGGTGAAAACTACCAAATG
ATGTCTGACACAACATTCAAAGCACTCAGGAGACAACTACCCATCACAAG
AACCAAGATTGATTGGAACAAGATTGTTTCATACCGAATTGGTGCTGAAT
TGAAAAGCTAAATGGGTGAATACTATGAACCAATCGCTGATGGAGAAAAG
cTGAGGATATGTTCCAGTTTTATCAAGCATGCACCTCCAGGAGAATTTAA
TGAAGTTTTTAATGATGTTCGAGTTTTATTGGACAATGATCAACTACTTA
AAGAACAAGCTTCTAGtGCTTTTTCACAGTACAACATGGAACAATTCACA
CCTTGTAAATTGAATAGTGGTGACAACGTACTGATCACCAAACACGGAGC
TTTGGACAACAATACATTCTATGATCCAAAAACCAAACAAAAGTTCAAAT
ATGACCATTTGAGAAAGGAAGCCACTGATTTAGAAGCTCACGACACAGGA
GATGCATCAGAATCGTGGAGAAGTGCTGTTGAAAGTGCTGTCGCAAATTA
TGTCAAAGATCATTATCCACATGGTGTTTTAACAGTTTATGGTAAATCTA
GTGGTTCTGACATCACCATCACAGCATGCGTGGAAGACCATCAATTTCAA
CCACAAAACTTCTGGAATGGTAGATGGCGATCAGAATGGTCGGTGACTTT
CAACTCAAGTGGTGGTAATGCAGAACTAAAAGGATTGTTAAAACTACAGG
TACATTATTATGAAGATGGTAATGTTCAATTGGTTTCACATAAAGATGTC
ACCAAAGAAATCAACGTCTCTGATGCAAATTCACTGGGAAGAGATTTAGC
AAAACATATAGACGATTCAGAAACTGAATACCAGAGAGCCATTGGTGAAA
ACTACCAAATGATGTCTGACACAACATTCAAAGCACTCAGGAGACAACTA
CCCATCACAAGAACCAAGATTGATTGGAACAAGATTGTTTCATACCGAAT
TGGTGCTGAATTGAAAAGCTAAATGGGTGAATACTATGAACCAATCGCTG
ATGGAGAAAAGcTGAGGATATGTTCCAGTTTTATCAAGCATGCACCTCCA
GGAGAATTTAATGAAGTTTTTAATGATGTTCGAGTTTTATTGGACAATGA
TCAACTACTTAAAGAACAAGCTTCTAGtGCTTTTTCACAGTACAACATGG
AACAATTCACACCTTGTAAATTGAATAGTGGTGACAACGTACTGATCACC
AAACACGGAGCTTTGGACAACAATACATTCTATGATCCAAAAACCAAACA
AAAGTTCAAATATGACCATTTGAGAAAGGAAGCCACTGATTTAGAAGCTC
ACGACACAGGAGATGCATCAGAATCGTGGAGAAGTGCTGTTGAAAGTGCT
GTCGCAAATTATGTCAAAGATCATTATCCACATGGTGTTTTAACAGTTTA
TGGTAAATCTAGTGGTTCTGACATCACCATCACAGCATGCGTGGAAGACC
ATCAATTTCAACCACAAAACTTCTGGAATGGTAGATGGCGATCAGAATGG
TCGGTGACTTTCAACTCAAGTGGTGGTAATGCAGAACTAAAAGGATTGTT
AAAACTACAGGTACATTATTATGAAGATGGTAATGTTCAATTGGTTTCAC
ATAAAGATGTCACCAAAGAAATCAACGTCTCTGATGCAAATTCACTGGGA
AGAGATTTAGCAAAACATATAGACGATTCAGAAACTGAATACCAGAGAGC
CATTGGTGAAAACTACCAAATGATGTCTGACACAACATTCAAAGCACTCA
GGAGACAACTACCCATCACAAGAACCAAGATTGATTGGAACAAGATTGTT
TCATACCGAATTGGTGCTGAATTGAAAAGCTAAATGGGTGAATACTATGA
ACCAATCGCTGATGGAGAAAAGcTGAGGATATGTTCCAGTTTTATCAAGC
ATGCACCTCCAGGAGAATTTAATGAAGTTTTTAATGATGTTCGAGTTTTA
TTGGACAATGATCAACTACTTAAAGAACAAGCTTCTAGtGCTTTTTCACA
GTACAACATGGAACAATTCACACCTTGTAAATTGAATAGTGGTGACAACG
TACTGATCACCAAACACGGAGCTTTGGACAACAATACATTCTATGATCCA
AAAACCAAACAAAAGTTCAAATATGACCATTTGAGAAAGGAAGCCACTGA
TTTAGAAGCTCACGACACAGGAGATGCATCAGAATCGTGGAGAAGTGCTG
TTGAAAGTGCTGTCGCAAATTATGTCAAAGATCATTATCCACATGGTGTT
TTAACAGTTTATGGTAAATCTAGTGGTTCTGACATCACCATCACAGCATG
CGTGGAAGACCATCAATTTCAACCACAAAACTTCTGGAATGGTAGATGGC
GATCAGAATGGTCGGTGACTTTCAACTCAAGTGGTGGTAATGCAGAACTA
AAAGGATTGTTAAAACTACAGGTACATTATTATGAAGATGGTAATGTTCA
ATTGGTTTCACATAAAGATGTCACCAAAGAAATCAACGTCTCTGATGCAA
ATTCACTGGGAAGAGATTTAGCAAAACATATAGACGATTCAGAAACTGAA
TACCAGAGAGCCATTGGTGAAAACTACCAAATGATGTCTGACACAACATT
CAAAGCACTCAGGAGACAACTACCCATCACAAGAACCAAGATTGATTGGA
ACAAGATTGTTTCATACCGAATTGGTGCTGAATTGAAAAGCTAAATGGGT
GAATACTATGAACCAATCGCTGATGGAGAAAAGcTGAGGATATGTTCCAG
TTTTATCAAGCATGCACCTCCAGGAGAATTTAATGAAGTTTTTAATGATG
TTCGAGTTTTATTGGACAATGATCAACTACTTAAAGAACAAGCTTCTAGt
GCTTTTTCACAGTACAACATGGAACAATTCACACCTTGTAAATTGAATAG
TGGTGACAACGTACTGATCACCAAACACGGAGCTTTGGACAACAATACAT
TCTATGATCCAAAAACCAAACAAAAGTTCAAATATGACCATTTGAGAAAG
GAAGCCACTGATTTAGAAGCTCACGACACAGGAGATGCATCAGAATCGTG
GAGAAGTGCTGTTGAAAGTGCTGTCGCAAATTATGTCAAAGATCATTATC
CACATGGTGTTTTAACAGTTTATGGTAAATCTAGTGGTTCTGACATCACC
ATCACAGCATGCGTGGAAGACCATCAATTTCAACCACAAAACTTCTGGAA
TGGTAGATGGCGATCAGAATGGTCGGTGACTTTCAACTCAAGTGGTGGTA
ATGCAGAACTAAAAGGATTGTTAAAACTACAGGTACATTATTATGAAGAT
GGTAATGTTCAATTGGTTTCACATAAAGATGTCACCAAAGAAATCAACGT
CTCTGATGCAAATTCACTGGGAAGAGATTTAGCAAAACATATAGACGATT
CAGAAACTGAATACCAGAGAGCCATTGGTGAAAACTACCAAATGATGTCT
GACACAACATTCAAAGCACTCAGGAGACAACTACCCATCACAAGAACCAA
GATTGATTGGAACAAGATTGTTTCATACCGAATTGGTGCTGAATTGAAAA
GCTAAATGGGTGAATACTATGAACCAATCGCTGATGGAGAAAAGcTGAGG
ATATGTTCCAGTTTTATCAAGCATGCACCTCCAGGAGAATTTAATGAAGT
TTTTAATGATGTTCGAGTTTTATTGGACAATGATCAACTACTTAAAGAAC
AAGCTTCTAGtGCTTTTTCACAGTACAACATGGAACAATTCACACCTTGT
AAATTGAATAGTGGTGACAACGTACTGATCACCAAACACGGAGCTTTGGA
CAACAATACATTCTATGATCCAAAAACCAAACAAAAGTTCAAATATGACC
ATTTGAGAAAGGAAGCCACTGATTTAGAAGCTCACGACACAGGAGATGCA
TCAGAATCGTGGAGAAGTGCTGTTGAAAGTGCTGTCGCAAATTATGTCAA
AGATCATTATCCACATGGTGTTTTAACAGTTTATGGTAAATCTAGTGGTT
CTGACATCACCATCACAGCATGCGTGGAAGACCATCAATTTCAACCACAA
AACTTCTGGAATGGTAGATGGCGATCAGAATGGTCGGTGACTTTCAACTC
AAGTGGTGGTAATGCAGAACTAAAAGGATTGTTAAAACTACAGGTACATT
ATTATGAAGATGGTAATGTTCAATTGGTTTCACATAAAGATGTCACCAAA
GAAATCAACGTCTCTGATGCAAATTCACTGGGAAGAGATTTAGCAAAACA
TATAGACGATTCAGAAACTGAATACCAGAGAGCCATTGGTGAAAACTACC
AAATGATGTCTGACACAACATTCAAAGCACTCAGGAGACAACTACCCATC
ACAAGAACCAAGATTGATTGGAACAAGATTGTTTCATACCGAATTGGTGC
TGAATTGAAAAGCTAAATGGGTGAATACTATGAACCAATCGCTGATGGAG
AAAAGcTGAGGATATGTTCCAGTTTTATCAAGCATGCACCTCCAGGAGAA
TTTAATGAAGTTTTTAATGATGTTCGAGTTTTATTGGACAATGATCAACT
ACTTAAAGAACAAGCTTCTAGtGCTTTTTCACAGTACAACATGGAACAAT
TCACACCTTGTAAATTGAATAGTGGTGACAACGTACTGATCACCAAACAC
GGAGCTTTGGACAACAATACATTCTATGATCCAAAAACCAAACAAAAGTT
CAAATATGACCATTTGAGAAAGGAAGCCACTGATTTAGAAGCTCACGACA
CAGGAGATGCATCAGAATCGTGGAGAAGTGCTGTTGAAAGTGCTGTCGCA
AATTATGTCAAAGATCATTATCCACATGGTGTTTTAACAGTTTATGGTAA
ATCTAGTGGTTCTGACATCACCATCACAGCATGCGTGGAAGACCATCAAT
TTCAACCACAAAACTTCTGGAATGGTAGATGGCGATCAGAATGGTCGGTG
ACTTTCAACTCAAGTGGTGGTAATGCAGAACTAAAAGGATTGTTAAAACT
ACAGGTACATTATTATGAAGATGGTAATGTTCAATTGGTTTCACATAAAG
ATGTCACCAAAGAAATCAACGTCTCTGATGCAAATTCACTGGGAAGAGAT
TTAGCAAAACATATAGACGATTCAGAAACTGAATACCAGAGAGCCATTGG
TGAAAACTACCAAATGATGTCTGACACAACATTCAAAGCACTCAGGAGAC
AACTACCCATCACAAGAACCAAGATTGATTGGAACAAGATTGTTTCATAC
CGAATTGGTGCTGAATTGAAAAGCTAAATGGGTGAATACTATGAACCAAT
CGCTGATGGAGAAAAGcTGAGGATATGTTCCAGTTTTATCAAGCATGCAC
CTCCAGGAGAATTTAATGAAGTTTTTAATGATGTTCGAGTTTTATTGGAC
AATGATCAACTACTTAAAGAACAAGCTTCTAGtGCTTTTTCACAGTACAA
CATGGAACAATTCACACCTTGTAAATTGAATAGTGGTGACAACGTACTGA
TCACCAAACACGGAGCTTTGGACAACAATACATTCTATGATCCAAAAACC
AAACAAAAGTTCAAATATGACCATTTGAGAAAGGAAGCCACTGATTTAGA
AGCTCACGACACAGGAGATGCATCAGAATCGTGGAGAAGTGCTGTTGAAA
GTGCTGTCGCAAATTATGTCAAAGATCATTATCCACATGGTGTTTTAACA
GTTTATGGTAAATCTAGTGGTTCTGACATCACCATCACAGCATGCGTGGA
AGACCATCAATTTCAACCACAAAACTTCTGGAATGGTAGATGGCGATCAG
AATGGTCGGTGACTTTCAACTCAAGTGGTGGTAATGCAGAACTAAAAGGA
TTGTTAAAACTACAGGTACATTATTATGAAGATGGTAATGTTCAATTGGT
TTCACATAAAGATGTCACCAAAGAAATCAACGTCTCTGATGCAAATTCAC
TGGGAAGAGATTTAGCAAAACATATAGACGATTCAGAAACTGAATACCAG
AGAGCCATTGGTGAAAACTACCAAATGATGTCTGACACAACATTCAAAGC
ACTCAGGAGACAACTACCCATCACAAGAACCAAGATTGATTGGAACAAGA
TTGTTTCATACCGAATTGGTGCTGAATTGAAAAGCTAAATGGGTGAATAC
TATGAACCAATCGCTGATGGAGAAAAGcTGAGGATATGTTCCAGTTTTAT
CAAGCATGCACCTCCAGGAGAATTTAATGAAGTTTTTAATGATGTTCGAG
TTTTATTGGACAATGATCAACTACTTAAAGAACAAGCTTCTAGtGCTTTT
TCACAGTACAACATGGAACAATTCACACCTTGTAAATTGAATAGTGGTGA
CAACGTACTGATCACCAAACACGGAGCTTTGGACAACAATACATTCTATG
ATCCAAAAACCAAACAAAAGTTCAAATATGACCATTTGAGAAAGGAAGCC
ACTGATTTAGAAGCTCACGACACAGGAGATGCATCAGAATCGTGGAGAAG
TGCTGTTGAAAGTGCTGTCGCAAATTATGTCAAAGATCATTATCCACATG
GTGTTTTAACAGTTTATGGTAAATCTAGTGGTTCTGACATCACCATCACA
GCATGCGTGGAAGACCATCAATTTCAACCACAAAACTTCTGGAATGGTAG
ATGGCGATCAGAATGGTCGGTGACTTTCAACTCAAGTGGTGGTAATGCAG
AACTAAAAGGATTGTTAAAACTACAGGTACATTATTATGAAGATGGTAAT
GTTCAATTGGTTTCACATAAAGATGTCACCAAAGAAATCAACGTCTCTGA
TGCAAATTCACTGGGAAGAGATTTAGCAAAACATATAGACGATTCAGAAA
CTGAATACCAGAGAGCCATTGGTGAAAACTACCAAATGATGTCTGACACA
ACATTCAAAGCACTCAGGAGACAACTACCCATCACAAGAACCAAGATTGA
TTGGAACAAGATTGTTTCATACCGAATTGGTGCTGAATTGAAAAGCTAAA
TGGGTGAATACTATGAACCAATCGCTGATGGAGAAAAGcTGAGGATATGT
TCCAGTTTTATCAAGCATGCACCTCCAGGAGAATTTAATGAAGTTTTTAA
TGATGTTCGAGTTTTATTGGACAATGATCAACTACTTAAAGAACAAGCTT
CTAGtGCTTTTTCACAGTACAACATGGAACAATTCACACCTTGTAAATTG
AATAGTGGTGACAACGTACTGATCACCAAACACGGAGCTTTGGACAACAA
TACATTCTATGATCCAAAAACCAAACAAAAGTTCAAATATGACCATTTGA
GAAAGGAAGCCACTGATTTAGAAGCTCACGACACAGGAGATGCATCAGAA
TCGTGGAGAAGTGCTGTTGAAAGTGCTGTCGCAAATTATGTCAAAGATCA
TTATCCACATGGTGTTTTAACAGTTTATGGTAAATCTAGTGGTTCTGACA
TCACCATCACAGCATGCGTGGAAGACCATCAATTTCAACCACAAAACTTC
TGGAATGGTAGATGGCGATCAGAATGGTCGGTGACTTTCAACTCAAGTGG
TGGTAATGCAGAACTAAAAGGATTGTTAAAACTACAGGTACATTATTATG
AAGATGGTAATGTTCAATTGGTTTCACATAAAGATGTCACCAAAGAAATC
AACGTCTCTGATGCAAATTCACTGGGAAGAGATTTAGCAAAACATATAGA
CGATTCAGAAACTGAATACCAGAGAGCCATTGGTGAAAACTACCAAATGA
TGTCTGACACAACATTCAAAGCACTCAGGAGACAACTACCCATCACAAGA
ACCAAGATTGATTGGAACAAGATTGTTTCATACCGAATTGGTGCTGAATT
GAAAAGCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032183XLOC_032183Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
F-actin capping protein subunit alphaTCONS_00050802-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050802-exon-scaffold_189-1491911889:108336..108543TCONS_00050802-exon-scaffold_189-1491911889:108336..108543Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1510915933:108336..108543TCONS_00050802-exon-scaffold_189-1510915933:108336..108543Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1575043694:108336..108543TCONS_00050802-exon-scaffold_189-1575043694:108336..108543Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1491911889:113814..113877TCONS_00050802-exon-scaffold_189-1491911889:113814..113877Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1510915933:113814..113877TCONS_00050802-exon-scaffold_189-1510915933:113814..113877Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1575043694:113814..113877TCONS_00050802-exon-scaffold_189-1575043694:113814..113877Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1491911889:114526..114577TCONS_00050802-exon-scaffold_189-1491911889:114526..114577Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1510915933:114526..114577TCONS_00050802-exon-scaffold_189-1510915933:114526..114577Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1575043694:114526..114577TCONS_00050802-exon-scaffold_189-1575043694:114526..114577Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1491911889:116232..116382TCONS_00050802-exon-scaffold_189-1491911889:116232..116382Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1510915933:116232..116382TCONS_00050802-exon-scaffold_189-1510915933:116232..116382Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1575043694:116232..116382TCONS_00050802-exon-scaffold_189-1575043694:116232..116382Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1491911889:116892..117008TCONS_00050802-exon-scaffold_189-1491911889:116892..117008Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1510915933:116892..117008TCONS_00050802-exon-scaffold_189-1510915933:116892..117008Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1575043694:116892..117008TCONS_00050802-exon-scaffold_189-1575043694:116892..117008Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1491911889:117416..117495TCONS_00050802-exon-scaffold_189-1491911889:117416..117495Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1510915933:117416..117495TCONS_00050802-exon-scaffold_189-1510915933:117416..117495Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1575043694:117416..117495TCONS_00050802-exon-scaffold_189-1575043694:117416..117495Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1491911889:118033..118117TCONS_00050802-exon-scaffold_189-1491911889:118033..118117Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1510915933:118033..118117TCONS_00050802-exon-scaffold_189-1510915933:118033..118117Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1575043694:118033..118117TCONS_00050802-exon-scaffold_189-1575043694:118033..118117Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1491911889:118446..118517TCONS_00050802-exon-scaffold_189-1491911889:118446..118517Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1510915933:118446..118517TCONS_00050802-exon-scaffold_189-1510915933:118446..118517Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1575043694:118446..118517TCONS_00050802-exon-scaffold_189-1575043694:118446..118517Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1491911889:118810..118872TCONS_00050802-exon-scaffold_189-1491911889:118810..118872Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1510915933:118810..118872TCONS_00050802-exon-scaffold_189-1510915933:118810..118872Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1575043694:118810..118872TCONS_00050802-exon-scaffold_189-1575043694:118810..118872Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1491911889:119631..120409TCONS_00050802-exon-scaffold_189-1491911889:119631..120409Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1510915933:119631..120409TCONS_00050802-exon-scaffold_189-1510915933:119631..120409Clytia hemisphaericaexon
TCONS_00050802-exon-scaffold_189-1575043694:119631..120409TCONS_00050802-exon-scaffold_189-1575043694:119631..120409Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_189supercontigscaffold_189:108336..120409 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
221.384	235.833	303.306	299.963	241.149	193.016	246.032	258.313	240.971	244.327	161.23	167.06	132.581	121.999	154.246	176.472	173.005	177.904	123.021	155.456	149.291	136.505	117.471	123.139	124.903	129.517	169.699	122.443	172.755	150.407
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002189CapZ_alpha
IPR017865F-actin_cap_asu_CS
Vocabulary: Cellular Component
TermDefinition
GO:0008290F-actin capping protein complex
Vocabulary: Biological Process
TermDefinition
GO:0051016barbed-end actin filament capping
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051016 barbed-end actin filament capping
cellular_component GO:0008290 F-actin capping protein complex
Blast
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BLAST of TCONS_00050802 vs. Swiss-Prot (Human)
Match: CAZA2 (F-actin-capping protein subunit alpha-2 OS=Homo sapiens GN=CAPZA2 PE=1 SV=3)

HSP 1 Score: 348.206 bits (892), Expect = 1.304e-115
Identity = 171/287 (59.58%), Postives = 215/287 (74.91%), Query Frame = 2 
Query:  170 MGEYYEPIADGEKLRICSSFIKHAPPGEFNEVFNDVRVLLDNDQLLKEQASSAFSQYNMEQFTPCKLNS-GDNVLITKHGALDNNTFYDPKTKQKFKYDHLRKEATDLEAHDTGDASESWRSAVESAVANYVKDHYPHGVLTVYGKSSGSDITITACVEDHQFQPQNFWNGRWRSEWSVTFNSSGGNAELKGLLKLQVHYYEDGNVQLVSHKDVTKEINVSDANSLGRDLAKHIDDSETEYQRAIGENYQMMSDTTFKALRRQLPITRTKIDWNKIVSYRIGAELKS 1027
            M +  E ++D EK+RI + FI HAPPGEFNEVFNDVR+LL+ND LL+E A+ AF+QYN++QFTP K+    D VLIT+HG L N  F DPK +  FK+DHLRKEATD    +  +A ESWR++VE+A+  YVK+HYP+GV TVYGK      TI AC+E HQFQ +NFWNGRWRSEW  T   S    ++ G+LK+QVHYYEDGNVQLVSHKD+   + VS+     ++  K ++ +E EYQ AI ENYQ MSDTTFKALRRQLP+TRTKIDWNKI+SY+IG E+++
Sbjct:    1 MADLEEQLSDEEKVRIAAKFIIHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNLDQFTPVKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRKEATDPRPCEVENAVESWRTSVETALRAYVKEHYPNGVCTVYGKKIDGQQTIIACIESHQFQAKNFWNGRWRSEWKFTITPS--TTQVVGILKIQVHYYEDGNVQLVSHKDIQDSLTVSNEVQTAKEFIKIVEAAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEMQN 285
The following BLAST results are available for this feature:
BLAST of TCONS_00050802 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAZA21.304e-11559.58F-actin-capping protein subunit alpha-2 OS=Homo sa... [more]
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