TCONS_00051187-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051187-protein
Unique NameTCONS_00051187-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length724

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051187-protein ID=TCONS_00051187-protein|Name=TCONS_00051187-protein|organism=Clytia hemisphaerica|type=polypeptide|length=724bp
LGLKNVTYKVCIVFQKMPEGPTSKVAVRCRPLTTNEKNNGATRVIKISGD
KISLHNPISSGSTKESNFSFDHCYSWEHKTKDVYQDLAEPMIKKALDGYN
VSFVAYGQSGAGKSNTILGTIEEPGLVTMVTQMLFTVIDEASSSKDYFVT
VSFLEVGDEHVHDLINPSGRDLKVRQHPQLGLYVDDMAEVVVDSSDDVIR
LCDQGNRILNLTSDNTNDVHRVSLMFTITVEQVNKGTLKGIRSTISFFDL
AASDHTSKSEESSFKSKSLNHLMQVVASLNQGTKTSSVSYRDCRLTKLLQ
DAFGGNSYLTMITHISPADTDYSETFSSLKFSSAVKNIKSLVKRNENDSS
GVVKELRDEIGRLRERLSEKSNNMIDMPDTDDVTRMEELLRDLQLAKMQT
WDEKQRISDMFLEERKHHLSSKGILDWVLDSMKKDGKKMQSKMANLQKDK
ERLMLDYKDKRKVVDDLKEALQQKIMEYTKLTEAGKSNEEEGKQKVAQIH
EMKEKLKQENDALKKLKLSLKDVQEKQKNEKEEAKTQTSALKGNMELRFK
LEAEQRDKMEKENQQTLADEIDRIKIETEQEKNEIKARKSGKTLSNDDLV
KVEMELLDLKAEKSAMAIKLRSLENEKKQVVKDLNELYKRQKEEMEIQQL
QHFQTFRHYREAFEEQKAALEQRYRSLLEDSIQDAVYLSSRNQELSDENQ
NLKQELAEMKDKLSMASGRPTSPD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032443XLOC_032443Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051187TCONS_00051187Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001752Kinesin_motor_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003777microtubule motor activity
GO:0008017microtubule binding
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007018 microtubule-based movement
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003777 microtubule motor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 489..584
NoneNo IPR availableCOILSCoilCoilcoord: 660..680
NoneNo IPR availableCOILSCoilCoilcoord: 353..373
NoneNo IPR availableCOILSCoilCoilcoord: 429..484
NoneNo IPR availableCOILSCoilCoilcoord: 685..719
NoneNo IPR availableCOILSCoilCoilcoord: 606..651
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 690..724
IPR001752Kinesin motor domainPRINTSPR00380KINESINHEAVYcoord: 244..262
score: 30.09
coord: 288..309
score: 46.86
coord: 98..119
score: 52.88
IPR001752Kinesin motor domainSMARTSM00129kinesin_4coord: 24..346
e-value: 5.8E-57
score: 205.2
IPR001752Kinesin motor domainGENE3D3.40.850.10coord: 15..352
e-value: 1.7E-85
score: 286.2
IPR001752Kinesin motor domainPFAMPF00225Kinesincoord: 28..338
e-value: 9.7E-69
score: 231.7
IPR001752Kinesin motor domainPROSITEPS50067KINESIN_MOTOR_2coord: 22..338
score: 71.394
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 24..371

Blast
[Close]
BLAST of TCONS_00051187-protein vs. Swiss-Prot (Human)
Match: KIF1C (Kinesin-like protein KIF1C OS=Homo sapiens GN=KIF1C PE=1 SV=3)

HSP 1 Score: 227.639 bits (579), Expect = 6.863e-63
Identity = 141/378 (37.30%), Postives = 213/378 (56.35%), Query Frame = 0 
Query:   20 GPTSKVAVRCRPLTTNEKNNGATRVIKISGDKISLHNPISSGSTKESNFSFDHCYSWEHKTKD---------VYQDLAEPMIKKALDGYNVSFVAYGQSGAGKSNTILGTIEEPGLVTMVTQM---LFTVIDEASSSK-DYFVTVSFLEVGDEHVHDLINPSGR-DLKVRQHPQLGLYVDDMAEVVVDSSDDVIRLCDQGNRILNLTSDNTNDVH-RVSLMFTITVEQVNKGTLKGIRS----TISFFDLAASDHTSKS-------EESSFKSKSLNHLMQVVASL----NQGTKTSSVSYRDCRLTKLLQDAFGGNSYLTMITHISPADTDYSETFSSLKFSSAVKNIKSLVKRNENDSSGVVKELRDEIGRLRERL 367
            G + KVAVR RP    E +  A  V+ + G+  S+ NP  S    +S F+FD+ Y W H + +         VY+D+ E M+  A +GYNV   AYGQ+GAGKS T++G  +EPG   +V Q+   LF+ + E  S++  Y V VS++E+  E V DL+NP  R  L+VR+HP LG YV D++++ V S  D+  L D GN+   + + N N+   R   +FTI   Q     L G+ S     IS  DLA S+    S       +E +  +KSL  L +V+++L    ++  K+  + YRD  LT LL++  GGNS   MI  +SPAD +Y ET S+L+++   K I+     NE+ ++ +++EL++E+ RLRE L
Sbjct:    3 GASVKVAVRVRPFNARETSQDAKCVVSMQGNTTSIINPKQSKDAPKS-FTFDYSY-WSHTSTEDPQFASQQQVYRDIGEEMLLHAFEGYNVCIFAYGQTGAGKSYTMMGR-QEPGQQGIVPQLCEDLFSRVSENQSAQLSYSVEVSYMEIYCERVRDLLNPKSRGSLRVREHPILGPYVQDLSKLAVTSYADIADLMDCGNKARTVAATNMNETSSRSHAVFTIVFTQRCHDQLTGLDSEKVSKISLVDLAGSERADSSGARGMRLKEGANINKSLTTLGKVISALADMQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADRTKQIRCNAIINEDPNARLIRELQEEVARLRELL 377
The following BLAST results are available for this feature:
BLAST of TCONS_00051187-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KIF1C6.863e-6337.30Kinesin-like protein KIF1C OS=Homo sapiens GN=KIF1... [more]
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