TCONS_00051215-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051215-protein
Unique NameTCONS_00051215-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length168

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051215-protein ID=TCONS_00051215-protein|Name=TCONS_00051215-protein|organism=Clytia hemisphaerica|type=polypeptide|length=168bp
MASAYRKGALMNKKKGPKPELTEEQKQEIREAFDLFDSDGSGTIDAKELK
VAMRALGFDPKKEEIKKMISDIDKDGSGTIDFNEFLVMMTSKMSEKDSKE
EILKAFRLFDDDNTGRISFKNLKRVAKELGENLTDEELQEMIDEADRDGD
GEINENEFLRVMKKTSLY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032464XLOC_032464Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051215TCONS_00051215Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 119..139
NoneNo IPR availableGENE3D1.10.238.10coord: 117..163
e-value: 1.2E-19
score: 69.6
NoneNo IPR availableGENE3D1.10.238.10coord: 78..116
e-value: 3.9E-20
score: 70.9
NoneNo IPR availableGENE3D1.10.238.10coord: 18..54
e-value: 1.0E-19
score: 69.7
NoneNo IPR availableGENE3D1.10.238.10coord: 55..77
e-value: 1.9E-20
score: 72.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
IPR002048EF-hand domainSMARTSM00054efh_1coord: 101..129
e-value: 2.3E-4
score: 30.5
coord: 64..92
e-value: 1.6E-9
score: 47.6
coord: 28..56
e-value: 1.2E-8
score: 44.7
coord: 137..165
e-value: 1.8E-8
score: 44.2
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 100..163
e-value: 2.7E-13
score: 50.1
coord: 27..89
e-value: 5.1E-16
score: 58.8
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 60..95
score: 15.797
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 133..168
score: 14.709
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 24..59
score: 17.303
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 97..132
score: 14.151
IPR002048EF-hand domainCDDcd00051EFhcoord: 28..90
e-value: 5.0018E-21
score: 81.4401
IPR002048EF-hand domainCDDcd00051EFhcoord: 101..163
e-value: 9.34793E-18
score: 72.5805
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 141..149
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 146..158
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 73..85
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 37..49
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 19..164

Blast
[Close]
BLAST of TCONS_00051215-protein vs. Swiss-Prot (Human)
Match: CETN2 (Centrin-2 OS=Homo sapiens GN=CETN2 PE=1 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 8.396e-94
Identity = 134/172 (77.91%), Postives = 155/172 (90.12%), Query Frame = 0 
Query:    1 MASAYRKGALMN----KKKGPKPELTEEQKQEIREAFDLFDSDGSGTIDAKELKVAMRALGFDPKKEEIKKMISDIDKDGSGTIDFNEFLVMMTSKMSEKDSKEEILKAFRLFDDDNTGRISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEINENEFLRVMKKTSLY 168
            MAS ++K  + +    K+  PKPELTEEQKQEIREAFDLFD+DG+GTID KELKVAMRALGF+PKKEEIKKMIS+IDK+G+G ++F +FL +MT KMSEKD+KEEILKAF+LFDDD TG+ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGE++E EFLR+MKKTSLY
Sbjct:    1 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY 172
The following BLAST results are available for this feature:
BLAST of TCONS_00051215-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CETN28.396e-9477.91Centrin-2 OS=Homo sapiens GN=CETN2 PE=1 SV=1[more]
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