TCONS_00051225-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051225-protein
Unique NameTCONS_00051225-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1015

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051225-protein ID=TCONS_00051225-protein|Name=TCONS_00051225-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1015bp
LPEAHTWNRSRAQKSMQRRLSPVVIDNTNVEAWHMKPYVADAIKFGYEVD
IHEMDTAWCFNCSELARKNKHNVNKQTIERLLEKYEKNITSDFLKFWVST
GSCPSKEPPPQDVRNCSQLEREVRKRNNSGSSSSTKPRDIPQFQVSATDD
NTNLGDLYFDGNYMPTDPDCREIAGASDPKYSQSPLVSRRNRSKSPRHQH
RHQRSSSPPRRNRSKTPPRRNRSKTPPRRRQSKSPQRNHRSKSPTRRLRS
KTPPRRKRSKSPGPSKSPGKSKEPLKTQAKLPSTGGAIPKTPSNANLDKI
IKDSNGKPLTPKQLNIRGNLYTAFPTADKATLDNLLESLAFNFEACSNFI
RWSGVPEAAPKIITGSGNTPNKQPTSSHQIQSSSKAKSKDTSSKKDDQSS
ASSSSSTSKASTSSSSSLGNDFHNPPPVSRLVEGAESMDTELPDTPRSSG
KLVEIIDSYKDSRLLLTHSSTDNKAGSETITPPKTVNEELKDFQEYNLKF
LYEIFPNMKKTCRKWLRRYNGDLMKTCDYLSRLSQTDLPANEDDDDISED
FEMIDLTNQDEDDEDADDDDLIVTGVVKPGAAPMTSTSTNNRRGKQVLGS
AGKMFRLEDDQESSSDALKVAIDKSLAMDMKNKFGTADDFTDGDLQYDDL
ILELNEDAAQQIYQILTKNLKAKKRKLESIDKDEEFAKRLQEEEDKQQKP
ATATASPAKQQPKKMRRVDIDTRYAKGQTAQLFTPKSAWNKQDQSSLTPI
EGIGGGQLTLEEVNGREELYRMFPGVNEEALDQLLEANNYNVDAAANMVT
SSTGAVRNRDLQADINDPAWKKVTSPPKKTRPAQDTPDSPAAQIIPVNNN
QQGGYFQNIADSENISYQDLRAEAELYAGMRREALQKAAEGYQAKNAGAA
QYYADKAKEHERKMKEAHHRAAELMLQRRNKKYMRDQKVIDLHGLHVGEA
INALKNFLENAQMISRHREVEVITGRGNHSIGGVSKIRNAVINYLRRGNF
RYRMMNAGGSVVIEI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032471XLOC_032471Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051225TCONS_00051225Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002625Smr_dom
IPR013899DUF1771
IPR003892CUE
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 663..683
NoneNo IPR availableCOILSCoilCoilcoord: 68..88
NoneNo IPR availableCOILSCoilCoilcoord: 907..927
NoneNo IPR availableGENE3D1.10.8.10coord: 767..798
e-value: 5.5E-6
score: 25.8
NoneNo IPR availableGENE3D1.10.8.10coord: 494..535
e-value: 0.15
score: 11.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 816..846
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 689..718
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 731..754
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..431
NoneNo IPR availableCDDcd14279CUEcoord: 767..798
e-value: 1.96462E-5
score: 42.0702
IPR002625Smr domainSMARTSM00463SMR_2coord: 937..1015
e-value: 1.2E-17
score: 74.6
IPR002625Smr domainPFAMPF01713Smrcoord: 940..998
e-value: 3.9E-12
score: 46.3
IPR002625Smr domainPROSITEPS50828SMRcoord: 940..1015
score: 27.541
IPR002625Smr domainSUPERFAMILY160443SMR domain-likecoord: 938..1012
IPR013899Domain of unknown function DUF1771SMARTSM01162DUF1771_2coord: 866..931
e-value: 2.8E-15
score: 66.8
IPR013899Domain of unknown function DUF1771PFAMPF08590DUF1771coord: 867..930
e-value: 1.3E-12
score: 47.8
IPR003892Ubiquitin system component CuePROSITEPS51140CUEcoord: 761..804
score: 10.876

Blast
[Close]
BLAST of TCONS_00051225-protein vs. Swiss-Prot (Human)
Match: N4BP2 (NEDD4-binding protein 2 OS=Homo sapiens GN=N4BP2 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 1.228e-27
Identity = 105/419 (25.06%), Postives = 183/419 (43.68%), Query Frame = 0 
Query:  616 DALKVAIDKSLAMDMKNKFGTADDFTDGDLQYDDLILELNEDAAQQIYQILTKNLKAKKRKLESIDKDEEFAKRLQEEEDKQQKPATATASPAKQQPKKMRRVDIDTRYAKGQTAQLFTPKSAWNKQDQSSLTPIEGIGGGQLTLEEVNG-----------------REELYRMFPGVNEEALDQLLEANNYNVDAAANMVTSSTGAVRNRDLQADINDPAWKKVTSPPKKTRPAQDTPDSPAAQIIPVNNNQQGGYFQNIADSENISYQDLRAEAELYAGMRREALQKAAEGYQAKNAGAAQYYADKAKEHERKMKEAHHRAAELMLQRRNKKYMRDQKVIDLHGLHVGEAINALKNFLENAQMISRHR----EVEVITGRGNHSIGGVSKIRNAVINYLRRGNFRYRMMNAGGSVVI 1013
            D L++A+   LA  +   FG       G L  +D ++ ++ + A+ I++   +++  ++R+ E         K +Q   D      T   +P ++  ++  +  + T  A    +++      WN Q +     +  I   ++ L+E +                   ++L+++FP +N+  L  + + +NY+++     +         + + A       + VTS   +    +        +  P   + Q        D E   Y D RAEA L+   R E   KA E Y+      A +YA +   HE+KMKEA+H AA  + ++ N   +  Q V+DLHGLHV EA+  L   LE      +       + VITGRGNHS GGV++I+ AVI YL   +FR+  +  G   V+
Sbjct: 1374 DCLELALPPELAFQLNELFGPVG-IDSGSLTVEDCVVHIDLNLAKVIHEKWKESVMERQRQEEV-----SCGKFMQ---DPSLVGHTGLDNPEQKSSQRTGKKLLKTLTA----SEMLPLLDHWNTQTKK--VSLREIMSEEIALQEKHNLKRETLMFEKDCATKLKEKQLFKIFPAINQNFLVDIFKDHNYSLEHTVQFLNCVLEGDPVKTVVAQEFVHQNENVTSHTGQKSKEKKPKKLKETEETPSELSFQ--------DFEYPDYDDYRAEAFLHQQKRMECYSKAKEAYRIGKKNVATFYAQQGTLHEQKMKEANHLAAIEIFEKVNASLL-PQNVLDLHGLHVDEALEHLMRVLEKKTEEFKQNGGKPYLSVITGRGNHSQGGVARIKPAVIKYLISHSFRFSEIKPGCLKVM 1768

HSP 2 Score: 103.605 bits (257), Expect = 3.264e-22
Identity = 44/90 (48.89%), Postives = 67/90 (74.44%), Query Frame = 0 
Query:    1 LPEAHTWNRSRAQKSMQRRLSPVVIDNTNVEAWHMKPYVADAIKFGYEVDIHEMDTAWCFNCSELARKNKHNVNKQTIERLLEKYEKNIT 90
            L EAH WN++RA+++ ++++SP++IDNTN++AW MKPYVA + K  Y+V   E DT W F   ELAR+N H V+K+ I R+LE Y++ ++
Sbjct:  489 LGEAHEWNQNRAKEAFEKKISPIIIDNTNLQAWEMKPYVALSQKHKYKVLFREPDTWWKFKPKELARRNIHGVSKEKITRMLEHYQRFVS 578
The following BLAST results are available for this feature:
BLAST of TCONS_00051225-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
N4BP21.228e-2725.06NEDD4-binding protein 2 OS=Homo sapiens GN=N4BP2 P... [more]
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