TCONS_00051230-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051230-protein
Unique NameTCONS_00051230-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length237

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051230-protein ID=TCONS_00051230-protein|Name=TCONS_00051230-protein|organism=Clytia hemisphaerica|type=polypeptide|length=237bp
METEDASDDFMGGYYQPPPLSMSMATSSYSNVGHGQGTSSSGGASNMSSL
PSTSSSSSRSAPMESIEDILSSSKLLFILRGLPGSGKTTRAMELTNDATL
GVILATDDFFTKDGVYTYNKKMIGKAHQWNQERTKLSMEACITPICIDNT
NTQKFEMKPYVLMADKYGYQVSIVEPTTDWKFTVETCLQKSSKNQTLKVD
DLKRMKKRYQRNVKLDDIRNCENPYQKKKKSSPVSED
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032473XLOC_032473Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051230TCONS_00051230Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 192..212
NoneNo IPR availableGENE3D3.40.50.300coord: 73..235
e-value: 1.7E-16
score: 60.3
NoneNo IPR availablePFAMPF13671AAA_33coord: 76..211
e-value: 1.5E-13
score: 51.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..64
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 75..210

Blast
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BLAST of TCONS_00051230-protein vs. Swiss-Prot (Human)
Match: N42L1 (NEDD4-binding protein 2-like 1 OS=Homo sapiens GN=N4BP2L1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 7.775e-42
Identity = 66/155 (42.58%), Postives = 97/155 (62.58%), Query Frame = 0 
Query:   71 SSSKLLFILRGLPGSGKTTRAMELTNDATLGVILATDDFFTK-DGVYTYNKKMIGKAHQWNQERTKLSMEACITPICIDNTNTQKFEMKPYVLMADKYGYQVSIVEPTTDWKFTVETCLQKSSKNQTLKVDDLKRMKKRYQRNVKLDDIRNCENP 224
            S  K L++LRGLPGSGKTT A +L +D    +I +TDDFF + DG Y +N   + +AH+WNQ+R + +M   I+PI IDNTN   +EMKPY +MA +  Y+V   EP T WKF V+   +++     +  + + RMK+RY+ +V    + + E P
Sbjct:   39 SFRKHLYLLRGLPGSGKTTLARQLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHEWNQKRARKAMRNGISPIIIDNTNLHAWEMKPYAVMALENNYEVIFREPDTRWKFNVQELARRNI--HGVSREKIHRMKERYEHDVTFHSVLHAEKP 191
The following BLAST results are available for this feature:
BLAST of TCONS_00051230-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
N42L17.775e-4242.58NEDD4-binding protein 2-like 1 OS=Homo sapiens GN=... [more]
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