Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00051244-protein ID=TCONS_00051244-protein|Name=TCONS_00051244-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1065bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00051244-protein vs. Swiss-Prot (Human)
Match: VP13A (Vacuolar protein sorting-associated protein 13A OS=Homo sapiens GN=VPS13A PE=1 SV=2) HSP 1 Score: 402.905 bits (1034), Expect = 2.476e-118 Identity = 310/1026 (30.21%), Postives = 489/1026 (47.66%), Query Frame = 0 Query: 6 ITHETRNNVLELQIYSAFWVLNKTGLDLQFKVRGENNIYTFPKDDSSTPLMLLYR-NRKKAKGNICLADSDDSWSEDFSLSAIGDENHVDIKDQHNQPYTIHIENVMSRTNLTNIITLSPRCIISNHTQNDIQFAEADKPIADVQWLSLAPNQSAPCWLHSPMSSVYLK--EAESPFYGSPLPFTYDAKYAKRLSEKHTVCVDINHLGERLIMNITKYEDGCIPLRIDNYCAMPIYVQQCGVSGLTNIREHSRNTSQFFNWAEYNKDTEIQVMYGRPT-ALVKHLHVSMDDWGKHSLRYADE------------VDRIHGRRKKGSGFPCRACRCSCLPLSHCCSQNDDTDREASRRLMDQVDTSVSPEPDSIDVEDGAQHVYWISYLEGMQRVVAFSTDIDVIGLLMKSGDLENLTMEAYLSLQGVGVSLLN---KQPVEVAYVTLTGGTSCWEVQ-SKNGRWKLLDVDISVLLEDAWKNNSKS-------VQYD-----KVQADLENMKMSKPMKGALRRSLDPAVWVEYKQSKSNSSIYTKLHRIQVDDQQFDISFPSVLYPHPLPEKIIKRNGIKPFFELCAVITHLHDVMI--FKYFKLLMQEMNLKVDRPIITGLMSLMFTAQTTAHDYHKYYEEDIKMLKESVEESIEKILVTQSTKILMCYFHLSPIKIHLSFSLEGNSTANED----------YLFEWFISTIGIHFTDISDAVIKLAFYERKNVFLSQDILVTDVSKHYALQAIKQFYVLVLGLDALGNPYGLITEFGKGFKDLFYEPYLGSVGGPREFGAGLASGIKSLLGHTIGGTAGAAALITEQLGQVVAALSFDSEYKRKRRREMREDPSGLAAGLATGGKQFVMGLVFGVSGLVTKPYQGAKKRGLEGFFKGIGRGLIGLFIKPTGGVIDLVTSSLDGVRRFAEQGGEDITVRLRLPRLTHPHEPVTIYCSEKAFGYSILRALITAKNQIAGDFKDHQVIPTHPNIVFIFTTKCIVQASQSKFFSEWNVEWKTSYDSLQR 987 +T+ T V+ +S +W++NKTG LQ+K G I+ + P++ ++ N + L +D S FS+ +G V K Y + + +S N+T I+T +P +I N ++ I AE + +WLSL Q P W S + ++ +E P +R+ N ++ CI LR+DN G+ N+ EHS + F ++ + G T L+ H + + + SL ++ D + RR K + CR +Q DD +M +D G + +Y +S+ EG+QR++ F+ D V + +S E E ++LQ VG+SL+N KQ EVAY+ +T WE + K RWK + V + LE +K ++S +Q D ++ NMK+ +P ALRR+ PA+ VEY S SS +++RIQ+ +Q FP V YP P+ + + KPF ++ V+ I KYFK+L+QEM+L++D I L LM A+ T + + + +DI+ KE + + LV QS L YFH+SPIK+HLS SL +D + + +IG TD+ D V KLAF+E F + L ++V +HY+ QAIKQ YVL+LGLD LGNP+GLI EF +G + FYEPY G++ GP EF G+A G+K+L+G +GG AGAA+ IT + + VAA++ D +Y++KRR M + P+G G+ GGK V G V G++G+VTKP +GA+K G GFFKG+G+GL+G +PTGG+ID+ +S+ G++R E + LR PR + + Y G +L+ + +N +K + + + + T + ++ ++ F + EW+ S+D + Sbjct: 2200 MTYNTGQTVVAF--HSPYWMVNKTGRMLQYKADG---IHRKHPPNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSNQFSIDTVGSHGAVKCKGL-KMDYQVGVTIDLSSFNITRIVTFTPFYMIKNKSKYHISVAEE----GNDKWLSLDLEQCIPFWPEYASSKLLIQVERSEDP-------------------------------PKRIYFN---KQENCILLRLDNELG--------GIIAEVNLAEHSTVIT-FLDYHD-----------GAATFLLINHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLK---WRCRKSHGEV-------TQKDD--------MMMPIDL-------------GEKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQEIAVALQDVGISLVNNYTKQ--EVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEREFKEYTESSPSEDKVIQLDTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIHGAVFPFVFYPVKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDLGFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTAS---LVDQSQVSLYEYFHISPIKLHLSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAMTMDEDYQQKRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATETSEVE---SLRPPRFFNEDGVIRPYRLRDGTGNQMLQVM---ENGRFAKYKYFTHVMINKTDMLMITRRGVLFVTKGT-FGQLTCEWQYSFDEFTK 3118 The following BLAST results are available for this feature:
BLAST of TCONS_00051244-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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