TCONS_00051272-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00051272-protein
Unique Name	TCONS_00051272-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	515

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00051272-protein ID=TCONS_00051272-protein|Name=TCONS_00051272-protein|organism=Clytia hemisphaerica|type=polypeptide|length=515bp
MENEEVQQQEGLNVDGFLKMVGEYGVYQKMLNVIFGLLQIPFALSTFIMY
FIALEPEWRCVANSTVCQLNGTFTNENTLRCQIQRSEWEFTKPKEYSIIV
DYDLVCGNTWFINMLTSVIFIGALISAIVLGWYSDNYGRKRISYVLFLMV
ILSNFLIIYTPGIGWFIALRFVAGIANFGIPSYFVMINEVVGNRHRAFAG
NLYWVFYAGALCILSLQAYLIESWKTLVITCTLPYLLLIFTYLFVPESVR
WLRLKEHANEALDIFRLIAKWNGRDFDSNATLSKASKLKEKTNPLDLFRT
KKMALTSTILFICLYTNSLVYFGISLAASDLGTGSIYLNFFLISIVEIPG
NIAATYICNRYGRKKSSTIPLALAGLVTLAVSLTPKNIFRIILGILGKFF
ITISFDCVSTLIVEAYPTNIRTAAMSTLGLAIYIGGASAPWIAKGLTQVS
PESPFYVMGALGLFSGIMCFLLPETRGVSMKETSVDVVDGQEDSAADSIE
SHNICLGERDGLLNK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_032499	XLOC_032499	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00051272	TCONS_00051272	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005828	MFS_sugar_transport-like
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0022857	transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 31..262 e-value: 4.5E-21 score: 74.6
None	No IPR available	GENE3D	1.20.1250.20		coord: 280..500 e-value: 4.0E-27 score: 94.3
IPR005828	Major facilitator, sugar transporter-like	PFAM	PF00083	Sugar_tr	coord: 92..484 e-value: 2.1E-25 score: 89.4
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 31..477 score: 17.8
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 108..473 e-value: 6.54074E-24 score: 100.466
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 108..482

Blast

[Close]

BLAST of TCONS_00051272-protein vs. Swiss-Prot (Human)
Match: S22A3 (Solute carrier family 22 member 3 OS=Homo sapiens GN=SLC22A3 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.808e-59
Identity = 151/531 (28.44%), Postives = 250/531 (47.08%), Query Frame = 0

Query:   15 DGFLKMVGEYGVYQKMLNVIFGLLQIPFALSTFIMYFIALEPE--W-----------RC------VANSTVCQLNGTFTNENTLRCQIQ----------------------------------RSEWEFTKPKEYSIIVDYDLVCGNTWFINMLTSVIFIGALISAIVLGWYSDNYGRKRISYVLFLMVILSNFLIIYTPGIGWFIALRFVAGIANFGI-PSYFVMINEVVGNRHRAFAGNLYWVFYAGALCILSLQAYLIESWKTLVITCTLPYLLLIFTYLFVPESVRWLRLKEHANEALDIFRLIAKWNGRDFDSNATLSKASKLKEKTNP--LDLFRTKKMALTSTILFICLYTNSLVYFGISLAASDLGTGSIYLNFFLISIVEIPGNIAATYICNRYGRKKSSTIPLALAGLVTLAVSLTPKNI--FRIILGILGKFFITISFDCVSTLIVEAYPTNIRTAAMSTLGLAIYIGGASAPWIAKGLTQVSPESPFYVMGALGLFSGIMCFLLPETRGVSMKETSVDV 487
            D  L+ VGE+G +Q+ + ++  L  + FA     + F+  +P+  W           RC        N T     G    E   RCQ                                    R  W + +    +I+ ++DLVC N W +++  +++ +G L  A  LG+ +D YGR  I  +  L V ++  ++ + P    F+  RF+ G+   G   + +V++ E+VG++ R   G +  +F+   + IL   AY I +W+ + +  TLP  L +  Y  VPES RWL  ++  ++AL I R IAK NG+   SN +    +  +E +NP  LDL RT +M   + IL    +T+++VY G+ +    +G G++Y++FF+  +VE+PG +       R GR+        +AG+  L  +  P+ I   R  +  LG+  IT++F+ V  +  E YPT +R   +S        GG  AP++   L  V  E P  + G L    G +  LLPET+G+++ ET  DV
Sbjct:    5 DEALQRVGEFGRFQRRVFLLLCLTGVTFAFLFVGVVFLGTQPDHYWCRGPSAAALAERCGWSPEEEWNRTAPASRGPEPPERRGRCQRYLLEAANDSASATSALSCADPLAAFPNRSAPLVPCRGGWRYAQ-AHSTIVSEFDLVCVNAWMLDLTQAILNLGFLTGAFTLGYAADRYGRIVIYLLSCLGVGVTGVVVAFAPNFPVFVIFRFLQGVFGKGTWMTCYVIVTEIVGSKQRRIVGIVIQMFFTLGIIILPGIAYFIPNWQGIQLAITLPSFLFLLYYWVVPESPRWLITRKKGDKALQILRRIAKCNGKYLSSNYSEITVTD-EEVSNPSFLDLVRTPQMRKCTLILMFAWFTSAVVYQGLVMRLGIIG-GNLYIDFFISGVVELPGALLILLTIERLGRRLPFAASNIVAGVACLVTAFLPEGIAWLRTTVATLGRLGITMAFEIVYLVNSELYPTTLRNFGVSLCSGLCDFGGIIAPFLLFRLAAVWLELPLIIFGILASICGGLVMLLPETKGIALPETVDDV 532

The following BLAST results are available for this feature:

BLAST of TCONS_00051272-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00051272-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S22A3	6.808e-59	28.44	Solute carrier family 22 member 3 OS=Homo sapiens ...	[more]

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TCONS_00051272-protein (polypeptide) - C. hemisphaerica