TCONS_00051280-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051280-protein
Unique NameTCONS_00051280-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length524

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051280-protein ID=TCONS_00051280-protein|Name=TCONS_00051280-protein|organism=Clytia hemisphaerica|type=polypeptide|length=524bp
MAAVESSSGTETETDSEYQEPNIKFISDEFPKVILRRSARQITREEEQEE
EKISNEAEADKIKEQKLLKTRVLQASGSDLGQAIFGFKTPKRKEALVNAA
QNSIQSGKKSTSKPRTKSKTNVSKEKASGRKPLKTLNKKTPFFVQENGGS
DLSDESEDSEESQSEDEENEDSKQTASKELTASDILDEYFEIHSAKNRTT
TSDKTLSRLTNPKLQQKDIISHLKEVQSTHIHETAKLIQMHSCYFQNWMF
QMLNGFNVLLYGFGSKHKLLEEFRKRHLKDQCHIVINGFFPSITIKQILN
MITEDLMNSQLSIRNTIDQANHIKKFYDVDKHGKLFLLIHNIDGQMLRSK
NVQSILSCLASAKNIHIISSIDHINAPLIWDQNISSQFNWLWHDCTTYDA
YNEETSYENSLMVQQSGSLALSSLIHVLRSLTPNAKGIFRLLVDIQLDNE
DNSSYQGLSFTDLYNRCRERFLVNSDLTLRAQLTEFKDHKLVKSKKGFNG
LEYLSVALDCGTLRQYLEHESSNT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032506XLOC_032506Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051280TCONS_00051280Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR007220ORC2
Vocabulary: Cellular Component
TermDefinition
GO:0000808origin recognition complex
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
cellular_component GO:0005634 nucleus
cellular_component GO:0000808 origin recognition complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..178
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 11..460
e-value: 2.0E-5
score: 22.7
IPR007220Origin recognition complex, subunit 2PFAMPF04084ORC2coord: 202..509
e-value: 3.2E-105
score: 351.6

Blast
[Close]
BLAST of TCONS_00051280-protein vs. Swiss-Prot (Human)
Match: ORC2 (Origin recognition complex subunit 2 OS=Homo sapiens GN=ORC2 PE=1 SV=2)

HSP 1 Score: 395.971 bits (1016), Expect = 3.674e-132
Identity = 191/351 (54.42%), Postives = 252/351 (71.79%), Query Frame = 0 
Query:  173 KQTASKELT---ASDILDEYFEIHSAKNRTTTSDKTLSRLTNPKLQQKDIISHLKEVQSTHIHETAKLIQMHSCYFQNWMFQMLNGFNVLLYGFGSKHKLLEEFRKRHLKDQCHIVINGFFPSITIKQILNMITEDLMNSQLSIRNTIDQANHIKKFYDVDKHGKLFLLIHNIDGQMLRSKNVQSILSCLASAKNIHIISSIDHINAPLIWDQNISSQFNWLWHDCTTYDAYNEETSYENSLMVQQSGSLALSSLIHVLRSLTPNAKGIFRLLVDIQLDNEDNSSYQGLSFTDLYNRCRERFLVNSDLTLRAQLTEFKDHKLVKSKKGFNGLEYLSVALDCGTLRQYLEHE 520
            K+T SK +     SD+++EYFE HS+ ++  TSD+TL +L   KL Q+ + + L +V  +   E  +L Q +   F  WM Q+  GFN++LYG GSK  LLE FR   L+D  H+VINGFFP I++K +LN ITE++++   + R+ +DQ + I   +  D   +LFLLIHN+D QMLR +  Q I+  L+S  NI++I+SIDH+NAPL+WD    S FNWLW++ TTY  Y EETSYENSL+V+QSGSL LSSL HVLRSLTPNA+GIFRLL+  QLDN+DN SY GLSF D Y +CRE FLVNSDLTLRAQLTEF+DHKL+++KKG +G+EYL + +D GTL  +LE E
Sbjct:  224 KETPSKRMKRDKTSDLVEEYFEAHSS-SKVLTSDRTLQKLKRAKLDQQTLRNLLSKVSPSFSAELKQLNQQYEKLFHKWMLQLHLGFNIVLYGLGSKRDLLERFRTTMLQDSIHVVINGFFPGISVKSVLNSITEEVLDHMGTFRSILDQLDWIVNKFKEDSSLELFLLIHNLDSQMLRGEKSQQIIGQLSSLHNIYLIASIDHLNAPLMWDHAKQSLFNWLWYETTTYSPYTEETSYENSLLVKQSGSLPLSSLTHVLRSLTPNARGIFRLLIKYQLDNQDNPSYIGLSFQDFYQQCREAFLVNSDLTLRAQLTEFRDHKLIRTKKGTDGVEYLLIPVDNGTLTDFLEKE 573
The following BLAST results are available for this feature:
BLAST of TCONS_00051280-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ORC23.674e-13254.42Origin recognition complex subunit 2 OS=Homo sapie... [more]
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