TCONS_00051291-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051291-protein
Unique NameTCONS_00051291-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2028

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051291-protein ID=TCONS_00051291-protein|Name=TCONS_00051291-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2028bp
QHSIMSKNSEDTVASIENLLQIIRSIKCTNEDKTDAYLTLFRLIQSNKQE
SISIITKQINSVLNTVQKHIQHNERSLAEAAITFLGYCLAIEEINFVCKD
ESLKNISKALCQILETNGEKTVIIRTLWCFCNQSMKKDIIEQYVERILVF
FSTLKENDKIKSETIYNEALKVIKKFCEQCPDSMRSNHDKWAPEMINSLT
SKVIKNQEVGFSALEASINVLMVNQEFVSSLLQRLNETEFSQTLNGLYDE
NQVHVLNIWACLLRIIGESFFQFNRIKVTNPLLKIAEKAFASKSPEVLLA
LNNLWRSLIDCVFTRPSEFFKRMEKIFLLPLKVRYKNEIVAQESLKTQWY
LLCNINQNVNDYIEKAIFVVFDLYLPTADATQAAVATSTNNNMKTPDRRK
SIHKSPKSPFNAPPKVKLLLAEMMLQLLTPLERRHQLKSQLELFKGPCID
KKILIKYCNKFICYLSDLTTSCTPKHENSIANVWYAFLVQLRQDSVECES
SAVLREVWGPITNSLKERVEQWSLSATSILKLLLLIPESFLKMTVGSVGL
KNGSEDEQISLFVIRLLLHKNFIDHEGYESERFFILFERAIGVVFSSMTD
QLRNVDRIFNILEESHGHLTNQDVRWRLWSTLTSLLQGYIIKTNNVNQDG
SMDHNFAAILKSLTYTVRFINLSKLQEGTFNELLKVWQEIMEAFCRGVSL
LSAEPNIAVEAFCKSLVSSKVIQNATDVKTLSTVIKMISTTTKHLDFSNL
TPVYTARLTPTKISKRLNNPLGNFESFVNVIEHCIEKSFELMPKGKQVEI
TFIELLESVEYFFTKIESENIVTSSLHHFAPYLSQLFDPKMKSSSKILMK
GEKVITQVYKSLENINEMNYTNDTLSKLDILLSKTLATTRKSLRMRTATF
WNHTFGKKTGLTYSEELKSVLTKYQAKLSLNVPGMKAPVTQDITFSQLMD
DTAQFPEDSSQVSTFMSPSKLKTKPSTHQSPVKIHGSFLSKHKKSPSNKL
GSPKDVLGNFLASGSTKSSPKSPFKNSPATTKHVRRKLPIMREDSCDFVE
IKDSPGTKKKRLLTEHQKEIMRERKELPAMYNTLDNSQDTTLMRALSQDM
TQMTQESLFRIPEQPEPNSDAKEQSADQMEEEMVKEMDEEPLPVSKVSEK
ETIIETKSDTSKQPSNETCIIKEDDIFEKTNDIHEKETETKAQNKTNEKE
TIDFEVEEKHVEEETESSDIIPSSQTQEPQSQKKRGRKSMLKSKTNTTDS
ILLGFNDIFPDKESEKEGETSCQETEVIKPTEDPTTVLLSEDVELFDAPS
SNRDNFSLTNTEESANQKDAPEQSTNEKKEENKADESSTNEKPSDQPILA
MEPKIIVDKLPNKRKRSVPTAKRTGYKRKRTEETTNSKENKLPTKRTRRS
LGAAKHEKPLPPQENVFDFTETEQPTTDIIRRRSKARKSVPASFKLKETE
TKDKEQIVRPVPQFSVTEPEQPIIDNKETILLSSQCMENKVEQNPDSIIN
GLESEPIKSDIVDEVSNKLPVPDLEKLQELSSPLPKTLPSIAKKYRDAPT
PFARHVASVSSPLSGNIPTVSSPLLRNQPSVSSPLSRNKVTVSSQISSVP
SPLGKPSISRLVKSPFVNYSTCSPTRASTDYAHSPCASPAGGILKKRLTP
FACVDSPSPPNKRRVSFQLPGGTILSCDEMEKITEAEDEEVIKTTRSPFY
TSLKRKSRDNLQSKLKKGKDQQKEQTSKEQNNNNNTNTTINSKSAVFPDL
VKCTAPIERVLPSLTFSRGFGHLVRAQNINTVGDLSSLSENQIEALPIRS
PKVKTVRSALRNFTTQMSRDKVVPKSPLVMGKLNDESLLDSTTPTKDETT
LVEEASLLLTPSRYHQEDEVKRTSLFNEKGDEISGDVSTEKPIPACAMEI
DLSENPKEIISETEEEISCTPPVTEEKSEIPTPLTPPEETVKILPEVEVN
PVQERTETEVIELPSKCDFTMQTPEKASPKKTLMEILDDHDLNFDQLTNK
QLFEMIGKLDVFKSNIMTELQNRIANKE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032508XLOC_032508Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051291TCONS_00051291Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR022031Rif1_N
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1119..1139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1112..1464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 957..1036
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1913..1937
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1705..1741
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 386..410
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 10..922
e-value: 7.9E-12
score: 43.1
IPR022031Telomere-associated protein Rif1, N-terminalPFAMPF12231Rif1_Ncoord: 31..352
e-value: 7.0E-37
score: 127.2
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 15..327

Blast
BLAST of TCONS_00051291-protein vs. Swiss-Prot (Human)
Match: RIF1 (Telomere-associated protein RIF1 OS=Homo sapiens GN=RIF1 PE=1 SV=2)

HSP 1 Score: 311.997 bits (798), Expect = 3.520e-85
Identity = 317/1185 (26.75%), Postives = 528/1185 (44.56%), Query Frame = 0
Query:   19 LLQIIRSIKCTNEDKTDAYLTLF-RLIQSNKQESISIITKQINSVLNTVQKHIQHNERSLAEAAITFLGYCLAIEEINFVCKDESLKNISKALCQILET--NGEKTVIIRTLWCFCNQSMKKDIIEQYVERILVFFSTLKENDKIKSETIYNEALKVIKKFCEQCPDSMRSNHDKWAPEMINSLTSKVIKNQEVGFSALEASINVLMVNQEFVSSLLQRLNETEFSQTLNGLY-DENQVHVLNIWACLLRIIGESFFQFNRIKVTNPLLKIAEKAFASKSPEVLLALNNLWRSLIDCVFTRPSEFF--KRMEKIFLLPLK-VRYKNEIVAQESLKTQWYLLCNINQNVNDYIEKAIFVVFDLYL-----PTADATQAAVATSTNNNMKTPDRRKSIHKSPKSPFNAPPKVKLLLAEMMLQLLT-PLERRHQLKSQLELFKGPCIDKKILIKYCNKFICYLSDL------TTSCTPKHENSIANVWYAFLVQLRQDSVECESSAVLREVWGPITNSLKERVEQWSLSATSILKLLLLIPESFLKMTVGSV------------GLKN---GSEDEQIS----------LFVIRLLLHKNFIDHEGYESERFFILFERAIGVVFSSMTDQLRNVDRIFNILEESHGHLTNQDVRWRLWSTLTSLLQGYIIKTNNVNQDGSMDHNFAAILKSLTYTVRFI-NLSKLQEGTFNELLKVWQEIMEAFCRGVSLLS-AEPNIAVEAFCKSLVSSKVIQNATDVKTLSTVIKMISTTTKHLDFSNLTPVYTARLT----PTKISKRLNNPLGNFESFVNVIEHCIEKSFELMPKGKQVEITFIELLESVEYFFTKIESENIVTSSLHHFAPYLSQ---LF------DPKMKSSSKILMKGEKVITQVYKSLENINEMNYTNDTLSKLDILLSKTLATTRKSLRMRTATFWNHTFGKKTGLTYSEELKSVLTKYQAKLSLNVPGMKAPVTQDITFSQLMDDTAQFPEDSSQVSTFMSPSKLKTKPSTHQSPVKIHGSFLSKHKKSPSNKLGSPKDVLGNFLASGSTKSS---PKSPFKNSPATTKHVRRKLPIMREDSCDFVEIKDSPGTKKKRLLTEHQKEIMR-ERKELPAMYNTLDNSQDTTLMRALSQDMTQMTQESLFRIPE-QPEPNSDAKEQ-SADQMEEEMVKEMD 1138
            LL+ +     ++  +TDAYLTL  R+     +E I+ I K++  +   ++ HI      L+ AA+  LG+CL   +I     + S  N  + L ++ +T  N +K V  R LW    Q+   +++ + V  I+     L    +  S  +  EAL VI +  EQ P  M     +WA  +I  +     K    G +ALE  + +L+  Q+ ++S+ ++L  T+    L  L+  +N+ +VL +W   ++++G +  +       N LL++ E  F S +P +       W+SLID     P      KR+ K+ + PL  +  + E +A   L+  WYLL  +  ++    E+    +    +      +       VATS   N  TP     +HK   SP+ AP   ++ L+  +  + T P  +   L+  L    GP   + +     NK +  L  L      + S   KH N++    +   V + +D+ +   SA+ +E+   +  S+ E   +     + +L LLL   ES +K  V  V            GL     GS   Q++          LF+I+L+ + NF++  G   ERFF+  E  +G V S  T  L   D + N++ ++   L N++  W++WS + + L   I +TN VNQ  +++HNF+AI  +LT  V  I +  +    T   LL+ W E+  AF R  +L++ AE N+  E     ++SS   +  +++  +  +I +I+     +DFS     Y  ++     P+  SK+ N PLG   S   +I   I  SF  +   +    T   +  S+    + +     + S +      L++   LF      D   K  S +  K EK++ ++   L+      Y ++ L +L  LL        K +R ++A FWN TF K   L Y EELK VLT+ + K  L +PG+               +T +  E+SS       P    T+ S  Q  VKI G     + K  S            FLA    K     P +  K   ++ K V+ ++ +  E S DFV I       K+R+LT+HQKE+++ +R ++PAMYN LD SQDT          TQ +QE    IP    +P  D+K   + +QM+ ++V   D
Sbjct:   12 LLETLEDPSASHGGQTDAYLTLTSRMTGEEGKEVITEIEKKLPRLYKVLKTHISSQNSELSSAALQALGFCLYNPKIT---SELSEANALELLSKLNDTIKNSDKNVRTRALWVISKQTFPSEVVGKMVSSIIDSLEILFNKGETHSAVVDFEALNVIVRLIEQAPIQMGEEAVRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIASITEQLMTTKLISELQKLFMSKNETYVLKLWPLFVKLLGRTLHRSGSF--INSLLQLEELGFRSGAPMIKKIAFIAWKSLIDNFALNPDILCSAKRL-KLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQVCVPLIQSTISIDSNASPQGNSCHVATSPGLNPMTP-----VHKGASSPYGAPGTPRMNLSSNLGGMATIPSIQLLGLEMLLHFLLGP---EALSFAKQNKLVLSLEPLEHPLISSPSFFSKHANTLITAVHDSFVAVGKDAPDVVVSAIWKELIS-LVKSVTESGNKKEKPGSEVLTLLLKSLESIVKSEVFPVSKTLVLMEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFN-NFLEC-GVSDERFFLSLESLVGCVLSGPTSPLAFSDSVLNVINQNAKQLENKEHLWKMWSVIVTPLTELINQTNEVNQGDALEHNFSAIYGALTLPVNHIFSEQRFPVATMKTLLRTWSELYRAFARCAALVATAEENLCCEELSSKIMSSLEDEGFSNLLFVDRIIYIITVMVDCIDFSPYNIKYQPKVKSPQRPSDWSKKKNEPLGKLTSLFKLIVKVI-YSFHTLSFKEAHSDTLFTIGNSITGIISSVLGHISLPSMIRKIFATLTRPLALFYENSKLDEVPKVYSCLNNKLEKLLGEIIACLQFSYTGTYDSELLEQLSPLLCIIFLHKNKQIRKQSAQFWNATFAKVMMLVYPEELKPVLTQAKQKFLLLLPGL---------------ETVEMMEESS------GPYSDGTENS--QLNVKISGMERKSNGKRDS------------FLAQTKNKKENMKPAAKLKLESSSLK-VKGEILLEEEKSTDFVFIPPEGKDAKERILTDHQKEVLKTKRCDIPAMYNNLDVSQDTLF--------TQYSQEEPMEIPTLTRKPKEDSKMMITEEQMDSDIVIPQD 1134          

HSP 2 Score: 98.5969 bits (244), Expect = 2.880e-20
Identity = 77/221 (34.84%), Postives = 115/221 (52.04%), Query Frame = 0
Query: 1623 SPTRASTDYAHSPCASPAGGILKKRLTPFACVDSPSPPNK-RRVSFQLP---GGTILSCDEMEKITEAEDEEVIKTTRSPFYTSLKR----KSRDNLQSK---LKKGKDQQKEQTSKEQNNNNNTNTTINSKS-AVFPDLVKCTAPIERVLPSLT---FSRGFGHLVRAQNINTVGDLSSLSENQIEALPIRSPKVKTVRSALRNFTTQMSRDKVVPKSPL 1828
            SP+   T    SP ASP+  ILK+ L      +  SP NK RRVSF  P    G     D    I  +       +  SP   S+K     +S+ N  S    L  G    K ++SK+   +     +I   + +V+P LV C AP++ +LP +T   ++RG G L+RA+NI T+GDLS+L+ ++I+ LPIRSPKV  V+ ALR +  Q  + + + + P+
Sbjct: 2161 SPSGMQTRCVWSPLASPSTSILKRGLKRSQEDEISSPVNKVRRVSFADPIYQAGLADDIDRRCSIVRSHS-----SNSSPIGKSVKTSPTTQSKHNTTSAKGFLSPGSRSPKFKSSKKCLISEMAKESIPCPTESVYPPLVNCVAPVDIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLTASEIKTLPIRSPKVSNVKKALRIYHEQQVKTRGLEEIPV 2376          
The following BLAST results are available for this feature:
BLAST of TCONS_00051291-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RIF13.520e-8526.75Telomere-associated protein RIF1 OS=Homo sapiens G... [more]
back to top