TCONS_00051327-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051327-protein
Unique NameTCONS_00051327-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length423

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051327-protein ID=TCONS_00051327-protein|Name=TCONS_00051327-protein|organism=Clytia hemisphaerica|type=polypeptide|length=423bp
MSQKTQKPTLTGQRIKTRKRDEKEKYDPSSFRDQIVAGLNEVNADLELAS
KFLIQSGSKLDFRRYAEALLDILITGGILAPGGTIVTDNAAISSICVFNT
EQDVDNMRNVIQLFERMIRQYKYLEKSLDDEMKKILMFLKGFTDVQRDRL
TLATYLLISSSLIQPTCLIQILNDHLVNEGIALEFARCFFSAWLAEKDAP
GLINILKKAEMDGKLMMLFPVHKRSIETFENYFNEADLKPIVDFQRNQNA
RIVTKEMKSRIKRLLEDESTAEEITSYMQETCEKNKIENLDIIPLLWSSL
MKGVEWNKKEDLLAEQILRHLKTYASVLQRFTTTPATELLLLQKIQEFCY
DNMSFLKLFQKIVMLLYKVDVIGEDTIIKWFKSGHSSKGKSVFLAQMEKM
VEWLQSAEEESSEEEDDDEEEED
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032520XLOC_032520Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051327TCONS_00051327Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003307W2_domain
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 404..423
NoneNo IPR availableGENE3D1.25.40.180coord: 189..423
e-value: 8.2E-38
score: 129.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableCDDcd11560W2_eIF5C_likecoord: 218..407
e-value: 1.36899E-86
score: 263.69
IPR003307W2 domainSMARTSM00515542_3coord: 325..410
e-value: 8.4E-28
score: 108.4
IPR003307W2 domainPFAMPF02020W2coord: 339..414
e-value: 4.7E-21
score: 74.6
IPR003307W2 domainPROSITEPS51363W2coord: 247..414
score: 25.131
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 255..408

Blast
[Close]
BLAST of TCONS_00051327-protein vs. Swiss-Prot (Human)
Match: BZW2 (Basic leucine zipper and W2 domain-containing protein 2 OS=Homo sapiens GN=BZW2 PE=1 SV=1)

HSP 1 Score: 427.943 bits (1099), Expect = 2.086e-148
Identity = 199/406 (49.01%), Postives = 287/406 (70.69%), Query Frame = 0 
Query:    4 KTQKPTLTGQRIKTRKRDEKEKYDPSSFRDQIVAGLNEVNADLELASKFLIQSGSKLDFRRYAEALLDILITGGILAPGGTIVTDN--AAISSICVFNTEQDVDNMRNVIQLFERMIRQYKYLEKSLDDEMKKILMFLKGFTDVQRDRLTLATYLLISSSLIQPTCLIQILNDHLVNEGIALEFARCFFSAWLAEKDAPGLINILKKAEMDGKLMMLFPVHKRSIETFENYFNEADLKPIVDFQRNQNARIVTKEMKSRIKRLLEDESTAEEITSYMQETCEKNKIENLDIIPLLWSSLMKGVEWNKKEDLLAEQILRHLKTYASVLQRFTTTPATELLLLQKIQEFCYDNMSFLKLFQKIVMLLYKVDVIGEDTIIKWFKSGHSSKGKSVFLAQMEKMVEWLQSA 407
            K QKP LTGQR KTRKRDEKEK++P+ FRD +V GLNE   DLE  +KFL  +GS+LD+RRYA+ L DIL+ G +LAPGGT + D     +++ CVF+  +D + +RN  Q+F ++IR+YKYLEK+ +DEMKK+L+FLK F++ ++ +L + + +L+ +  +  T L  +  D LV EGIA  FA   F AW+AEKDA  + + L+KA +D +L+ LFPV+++S++ F  YF +A LK + DF R Q +    KE++  ++  L  E   +E+  Y++E  ++N +    +I LLW+ +M  VEWNKKE+L+AEQ L+HLK YA +L  F++   +EL+LLQK+QE+CYDN+ F+K FQKIV+L YK DV+ E+ I+KW+K  H +KGKSVFL QM+K VEWLQ+A
Sbjct:    3 KHQKPVLTGQRFKTRKRDEKEKFEPTVFRDTLVQGLNEAGDDLEAVAKFLDSTGSRLDYRRYADTLFDILVAGSMLAPGGTRIDDGDKTKMTNHCVFSANEDHETIRNYAQVFNKLIRRYKYLEKAFEDEMKKLLLFLKAFSETEQTKLAMLSGILLGNGTLPATILTSLFTDSLVKEGIAASFAVKLFKAWMAEKDANSVTSSLRKANLDKRLLELFPVNRQSVDHFAKYFTDAGLKELSDFLRVQQSLGTRKELQKELQERLSQECPIKEVVLYVKEEMKRNDLPETAVIGLLWTCIMNAVEWNKKEELVAEQALKHLKQYAPLLAVFSSQGQSELILLQKVQEYCYDNIHFMKAFQKIVVLFYKADVLSEEAILKWYKEAHVAKGKSVFLDQMKKFVEWLQNA 408
The following BLAST results are available for this feature:
BLAST of TCONS_00051327-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BZW22.086e-14849.01Basic leucine zipper and W2 domain-containing prot... [more]
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