TCONS_00051350-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051350-protein
Unique NameTCONS_00051350-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length180

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051350-protein ID=TCONS_00051350-protein|Name=TCONS_00051350-protein|organism=Clytia hemisphaerica|type=polypeptide|length=180bp
MSVSLTPEKENQLNLVSQLLKIKNPIIRFVAKVVGTLVSSFPAVKFAQLH
YRHIEKVKSEALAKNKGNYEAKCQLSNESRAELKWWKTAILKNWISPPPI
TLEMKTDASTGDFSPNSSGGWGATCQDIQCGGGWDIIKQSYHINTRELLA
IYFALRSFKNLCKSKHVRILSDNTTAICTV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032535XLOC_032535Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051350TCONS_00051350Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 87..180
e-value: 2.4E-5
score: 23.4
NoneNo IPR availableCDDcd09275RNase_HI_RT_DIRS1coord: 106..177
e-value: 7.40313E-16
score: 68.8491

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051350-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top