TCONS_00051367-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051367-protein
Unique NameTCONS_00051367-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length311

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051367-protein ID=TCONS_00051367-protein|Name=TCONS_00051367-protein|organism=Clytia hemisphaerica|type=polypeptide|length=311bp
MFNFMNDMMNLASSYKTQYKCYSVSMLAGNERKDVEKGGKIILPPSALDV
LTRLNIVYPMLFKLTNKRAKRNTHCGVLEFVADEGKAYIPHWMMQNLYLQ
EGDLVSIESASLPVATFARFQPQTVDFLDITNPKAVLESVLRYFACLTKG
DVLAIKYNDKIYEILVLETKPSDAVSIIECDMQVDFATPVGYVPPERPTS
SKAKEEEHQEPSLEGIPEQYIDRGSQNVFPGSGNRLDGKKRKNRESTDSN
QQFKPTIIQSGIPDLNYQIGTLEFKRVTLKPANPSQDDQESSFEAFGGDG
QTLRKKTTSVR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032551XLOC_032551Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051367TCONS_00051367Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004854Ufd1-like
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004854Ubiquitin fusion degradation protein Ufd1-likePFAMPF03152UFD1coord: 15..189
e-value: 2.2E-77
score: 258.3
NoneNo IPR availableGENE3D2.40.40.20coord: 79..157
e-value: 4.2E-11
score: 42.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..311

Blast
[Close]
BLAST of TCONS_00051367-protein vs. Swiss-Prot (Human)
Match: UFD1 (Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Homo sapiens GN=UFD1 PE=1 SV=3)

HSP 1 Score: 332.798 bits (852), Expect = 1.597e-114
Identity = 173/296 (58.45%), Postives = 211/296 (71.28%), Query Frame = 0 
Query:   15 YKTQYKCYSVSMLAG-NERKDVEKGGKIILPPSALDVLTRLNIVYPMLFKLTNKRAKRNTHCGVLEFVADEGKAYIPHWMMQNLYLQEGDLVSIESASLPVATFARFQPQTVDFLDITNPKAVLESVLRYFACLTKGDVLAIKYNDKIYEILVLETKPSDAVSIIECDMQVDFATPVGYVPPERPTSSKAKEEEHQEPSLEGIPEQ--YIDRGSQNVFPGSGNRLDGKKRKNRESTDSNQQFKPTIIQSGIPDLNYQIGTLEFKRVTLKPANPSQDDQESS-FEAFGGDGQTLRKK 306
            + TQY+C+SVSMLAG N+R DVEKGGKII+PPSALD L+RLNI YPMLFKLTNK + R THCGVLEFVADEG  Y+PHWMMQNL L+EG LV +ES +L VAT+++FQPQ+ DFLDITNPKAVLE+ LR FACLT GDV+AI YN+KIYE+ V+ETKP  AVSIIECDM VDF  P+GY  PER       + +H+E S EG  +   Y        F GSGNRLDGKK+    S       KP  I+ GIP+  +++G + F R +       ++D+    F AF G+GQ+LRKK
Sbjct:   19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPER-------QVQHEE-STEGEADHSGYAGELGFRAFSGSGNRLDGKKKGVEPSPSP---IKPGDIKRGIPNYEFKLGKITFIRNSRPLVKKVEEDEAGGRFVAFSGEGQSLRKK 303
The following BLAST results are available for this feature:
BLAST of TCONS_00051367-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UFD11.597e-11458.45Ubiquitin recognition factor in ER-associated degr... [more]
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