TCONS_00051395-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051395-protein
Unique NameTCONS_00051395-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length406

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051395-protein ID=TCONS_00051395-protein|Name=TCONS_00051395-protein|organism=Clytia hemisphaerica|type=polypeptide|length=406bp
MLYLEDYIELIEQLPQDLRDRFTDMRELDLKVQNNIDTLDSRVRRFFTEA
RKSKPDQVEEDYKNIHQSYKQALDNADEKVSMASQIYDLVDRHLRKLDQE
LSRFKMELEADCSGITEILERRSVVGAEERTLDLLYNSTFSNTTGEPLKR
KFGDVERLTTACLSNGLTDKLFGGTTTSYNNPLGASYPPTKSNSQPSSSQ
SQKTISQQVPSKTLLTNKSLITSTNPKEQGRTAQASLKAMNAAQKKAEQL
GNSLSMSGLLSSSSNKSTSSASSTNSATSASFVDVTGSSSFMTSSSASQS
LHKQNAASAAANSRVPQKGRRGHKGIAGQGQDKPFNENAAIDWVPDPNEP
TYCLCNQVSYGEMVGCDNPSCPIEWFHYGCVGLTDAPKGKWYCPDCSAVI
KKRRMR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032569XLOC_032569Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051395TCONS_00051395Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR024610ING_N_histone_binding
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..338
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..279
NoneNo IPR availableCDDcd15585PHD_ING3coord: 352..396
e-value: 1.99609E-33
score: 118.708
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 352..397
e-value: 5.9E-12
score: 55.7
IPR024610Inhibitor of growth protein, N-terminal histone-bindingSMARTSM01408ING_2coord: 3..104
e-value: 1.3E-30
score: 117.7
IPR024610Inhibitor of growth protein, N-terminal histone-bindingPFAMPF12998INGcoord: 3..104
e-value: 2.7E-27
score: 95.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 348..406
e-value: 5.0E-21
score: 73.9
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 353..396
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 350..399
score: 9.089
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 341..402

Blast
[Close]
BLAST of TCONS_00051395-protein vs. Swiss-Prot (Human)
Match: ING3 (Inhibitor of growth protein 3 OS=Homo sapiens GN=ING3 PE=1 SV=2)

HSP 1 Score: 300.056 bits (767), Expect = 1.105e-98
Identity = 188/431 (43.62%), Postives = 262/431 (60.79%), Query Frame = 0 
Query:    1 MLYLEDYIELIEQLPQDLRDRFTDMRELDLKVQNNIDTLDSRVRRFFTEARKSKPDQVEEDYKNIHQSYKQALDNADEKVSMASQIYDLVDRHLRKLDQELSRFKMELEADCSGITEILERRSV-----------------VGAEERTLDLLYNSTFSNTTGEPLKRKFGDVERLTTACLSNGLTDKLFGGTTTSYNNPLGASYPPTKSNSQPSSSQSQKTISQQVPSK--TLLTNKSLITSTNPKEQGRTAQASLKAMNAAQKKAE-QLGNSLSMS----GLLSSSSNKSTSSASSTNSATSASFVDVTGSSSFMTSSSASQSLHKQNAASAAANSRVPQKGRRGHKGIAGQGQDKPFNE-NAAIDWVPDPNEPTYCLCNQVSYGEMVGCDNPSCPIEWFHYGCVGLTDAPKGKWYCPDCSAVIKKRRMR 406
            MLYLEDY+E+IEQLP DLRDRFT+MRE+DL+VQN +D L+ RV  FF  A+K+KP+  EE   +I + Y +AL++ADEKV +A+QIYDLVDRHLRKLDQEL++FKMELEAD +GITEILERRS+                    E+R     YN T  +TT + +  K    E L +   S+   +   G    +       +Y    ++SQP  S +  ++S    +   T+   +++  +   KE  RT  +SLKA   A K  + QLG   SM+    G  SSS+  +T + ++++SA  +     + +++  +S  +S S    + +S +++S V Q+       I+ Q    P ++ N+ +DW  DPNEP YC+CNQVSYGEMVGCDN  CPIEWFHYGCVGLT+APKGKWYCP C+A +K+R  R
Sbjct:    1 MLYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQMASIKKDYYKALEDADEKVQLANQIYDLVDRHLRKLDQELAKFKMELEADNAGITEILERRSLELDTPSQPVNNHHAHSHTPVEKRK----YNPTSHHTTTDHIPEKKFKSEALLSTLTSDASKENTLGCRNNNSTASSNNAY--NVNSSQPLGSYNIGSLSSGTGAGAITMAAAQAVQATAQMKEGRRT--SSLKASYEAFKNNDFQLGKEFSMARETVGYSSSSALMTTLTQNASSSAADSRSGRKSKNNNKSSSQQSSSSSSSSSLSSCSSSSTVVQE-------ISQQTTVVPESDSNSQVDWTYDPNEPRYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCPQCTAAMKRRGSR 416
The following BLAST results are available for this feature:
BLAST of TCONS_00051395-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ING31.105e-9843.62Inhibitor of growth protein 3 OS=Homo sapiens GN=I... [more]
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