TCONS_00051405-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051405-protein
Unique NameTCONS_00051405-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length461

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051405-protein ID=TCONS_00051405-protein|Name=TCONS_00051405-protein|organism=Clytia hemisphaerica|type=polypeptide|length=461bp
MTSRQLSVHNQNGSRRSPDQSDSSTISHSSPGHRTHAPRSTTSQRRTTSK
PLNFQQAMSDFRTMFPELDTDVIETVLRANNGVVQTTIDQLLQLQESTQV
EKAQSGPVLPSYESSIGDGEEPPPAYNDIWEDIGPPEPDPLFPNPKVNAK
IQSQQTIAVEKPKKFPRNALWNAPLVGKLPNDFLRIDNIVSTNNSNALTA
DSREQSNYMNLNNKDCKPKHNEKDFMTDDDLERFMEDEKLAIFLQNEEFL
RELRRNREFVSSLEADHQEAMMASGSAATPPAASVGSGGARPRTTPTQED
AQFRQKLRHMGKSTRKKFGKMAKKFSRNKSSGKPAPLSMTSSESTFNLLG
DDEDEEPPRTTDLFAIDEDDDDDMLNPGGFGANVPGDQREQDNPDSTPFN
KYAVQNENKRARPRPSVKGGRQLPKPPGTATSTTTTTTNNGVADEPIVFY
SEDNEFAFKNE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032576XLOC_032576Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051405TCONS_00051405Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003892CUE
IPR009060UBA-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003892Ubiquitin system component CueSMARTSM00546cue_7coord: 53..95
e-value: 6.6E-11
score: 52.2
IPR003892Ubiquitin system component CuePFAMPF02845CUEcoord: 54..95
e-value: 2.8E-12
score: 46.0
IPR003892Ubiquitin system component CuePROSITEPS51140CUEcoord: 53..96
score: 15.745
NoneNo IPR availableGENE3D1.10.8.10coord: 53..97
e-value: 6.8E-14
score: 50.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51
NoneNo IPR availableCDDcd14366CUE_CUED1coord: 54..94
e-value: 8.20389E-17
score: 73.4148
IPR009060UBA-likeSUPERFAMILY46934UBA-likecoord: 50..95

Blast
[Close]
BLAST of TCONS_00051405-protein vs. Swiss-Prot (Human)
Match: CUED1 (CUE domain-containing protein 1 OS=Homo sapiens GN=CUEDC1 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.888e-39
Identity = 120/342 (35.09%), Postives = 169/342 (49.42%), Query Frame = 0 
Query:   52 LNFQQAMSDFRTMFPELDTDVIETVLRANNGVVQTTIDQLLQLQESTQVEKAQSGPVLPSYESSIGDGEEPPPAYNDIWEDIGPP-----EPDPLFPNPKVNAKIQSQQ-------------TIAVEKPKKFPRNALWNAPLVGKLPNDFLRI-----DNIVSTNNSNALTADSREQSNYMNLNNKDCKPKH---NEKDFMTDDDLERFMEDEKLAIFLQNEEFLRELRRNREFVSSLEADH--------QEAMMASGSAATPPAASVGSGGARPRTTPTQEDAQFRQKLRHMGKSTRKKFGKMAKKFS---RNKSSGKPAPL---SMTSSESTFNLLGDDE 353
            L F QAM DF+TMFP +D D+IE VLRAN+G V  TIDQLLQ+          SG V   YE S    +  PP   +I E    P     EP P++  P  +  +  +               +    P    R   WN PL+G LP+DFLRI     D+I    N+      S E           C P        D   +   ++++EDE++A+FLQNEEF++EL+RNR+F+ +LE D         + + +A G+     +   G+G A P  +   EDA FR KL+HMGKSTR+K  ++A+ FS   + + S +   L   S+ ++ ST NLL D E
Sbjct:   45 LEFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMNLEG---GGSSGGV---YEDSSDSEDSIPP---EILERTLEPDSSDEEPPPVYSPPAYHMHVFDRPYPLAPPTPPPRIDALGSGAPTSQRRYRNWNPPLLGNLPDDFLRILPQQLDSI--QGNAGGPKPGSGE----------GCPPAMAGPGPGD--QESRWKQYLEDERIALFLQNEEFMKELQRNRDFLLALERDRLKYESQKSKSSSVAVGNDFGFSSPVPGTGDANPAVS---EDALFRDKLKHMGKSTRRKLFELARAFSEKTKMRKSKRKHLLKHQSLGAAASTANLLDDVE 360
The following BLAST results are available for this feature:
BLAST of TCONS_00051405-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CUED12.888e-3935.09CUE domain-containing protein 1 OS=Homo sapiens GN... [more]
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