TCONS_00051415-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051415-protein
Unique NameTCONS_00051415-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1421

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051415-protein ID=TCONS_00051415-protein|Name=TCONS_00051415-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1421bp
MALLEKSSKLKELLDKLKEINRLQHSPVEVFDQISTMLEEEANVYDASDP
DPFHEQQSHRNIREEADSSWKHLLEIVADADELRYKYLTINYITKRENDF
ELNCAMARLLINLEPALPWSNFFSDLDQFVPKCLEWAKDGKEPLRSYACA
LMVKGMRTPSGPSHFMDKICELTKILIQRLQYLSKEPDSKQPCVEDFGKL
PDIISTPQVNKKSRKSDAGRSKCDQTKTPTSSRKRKLVPPKPTKPFQYER
LSMSLKPLTIGKQQELILRFLYPISEYQELLPIVLETNVLNLIFHYIDHT
KQPNGHLACAALMYLSSLLCHKKFIVEFINRHGIQKILEIPQPSSVATMS
SLCLYYLVYNNGNEDCIERICLLPHSTLQRLVAFLLKLSESSHVSGRCHS
SLFFSLTFSFKAILQLFDSMDGLRKIVNLISTLKIMRIGESDLSSDDDVY
LDHEMAKNACQTLKKYFETHITMIGETYKTSKNVVNQLPKYKPLQITPES
LEKSFNKIIKNTSDGVATTKEGYFLKKIISLEIPQLLLQLITTTAERKNY
EHKNELLVTALDILLALSVFKEIAFSFCQKISINAAESSSGMGILLTAIE
GSIEKDIEVRKAALKVLCNCVTSSKSLIQDNTSAITNPQRKNLTESNGTD
TTNHYSNHSNNNKVKLIEKIWSSFRXHSNNNKVKLIEKIWSSFRSNNGIM
ILLRTLEIASPLTEADSIRALVCKALYGIAENKLISQILGRLPMFHNEEI
HQLMKEPILSDRITEHNMFTQYASLLLERVTGIPSKTTYNSAQASIISQT
RITYSQKELLQVVYNHLKKSGLSKAAEVLKDEADLPSTTEDKRTTFGTPS
ITIPKDLCSPSITNEKTPFNNKTFSRTLSTSNTPISSPQTERRVLFTPNR
RKSIASPSVFTPQSSQSPVVPKQQQYQRPVSPPPPTLDNIITSYLREQHA
RCANPVATCPPFSLFRPHNCPKPKYRQRASNNITKRLFDRQGNPPQGGQM
GCKYTRRFLYSKFRSGVTYRGPGDEEEMYTAGTWMSDSGSMAFGTVAGYV
KVVNYLGQDELAHTAHESAIISIESSKDCKLIATSAEHGPPTGCVWRVVE
SPVENGLFSLENAFELPEDAYLKFNNSQDRVIGTNTLTANVYDLGTGQRI
GTYHDENNTNNYTKNNACFSPCDNLLLNDGVLWDIRGKQLIHKFDKFNNR
VSGIFHPAGREIIIDSEVWDLRTFRLLDTYPELEDCHIRFSGLGDVFYTG
KLRAKYFDSYLKNGILGPYESSFRVFDAYDYSALGTVDTKRIIIDVLPDP
SDQCLAVLEDDPVMRFEFDTTCRIYNIGRTKRFGEEEEESESDENEENGH
ESSADNDEGDDEDAETMMEIFSNLLGEGDDLQGDEDDDEATIDGDEDDFS
GSDGDNDWVDMSDDDDDDDVY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032580XLOC_032580Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051415TCONS_00051415Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006594LisH
IPR011989ARM-like
IPR015943WD40/YVTN_repeat-like_dom
IPR016024ARM-type_fold
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..23
IPR006594LIS1 homology motifSMARTSM00667Lishcoord: 805..837
e-value: 2.1E-4
score: 30.6
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 805..837
score: 9.821
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 7..819
e-value: 3.0E-15
score: 55.1
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 871..1368
e-value: 8.9E-25
score: 86.9
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1368..1398
coord: 106..206
coord: 284..758
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 1030..1311

Blast
BLAST of TCONS_00051415-protein vs. Swiss-Prot (Human)
Match: DCAF1 (DDB1- and CUL4-associated factor 1 OS=Homo sapiens GN=DCAF1 PE=1 SV=3)

HSP 1 Score: 790.03 bits (2039), Expect = 0.000e+0
Identity = 489/1444 (33.86%), Postives = 749/1444 (51.87%), Query Frame = 0
Query:    4 LEKSSKLKELLDKLKEINRLQHSPVEVFDQISTMLEEEANVYDASDPDPFHEQQSHRNIREEADSSWKHLLEIVADADELRYKYLTINYITKRENDFELNCAMARLLINLEPALPWSNFFSDLDQFVPKCLEWAKDGKEPLRSYACALMVKGMRTPSGPSHFMDKICELTKILIQRLQYL----------SKEPDSKQPCVE------------DFGKLP-DII----------------------STPQVNKKSRKSDAGRSKCDQTKTPTSSRKRK------LVPPKPTKPF------QYERLS-------MSLKPLTIGKQQELILRFLYPISEYQELLPIVLETNVLNLIFHYIDHTKQPNGHLACAALMYLSSLLCHKKFIVEFINRHGIQKILEIPQPSSVATMSSLCLYYLVYNNGNEDCIERICLLPHSTLQRLVAFLLKLSESSHVSGRCHSSLFFSLTFSFKAILQLFDSMDGLRKIVNLISTLKIMRI-GESDLSSDDDVYLDHEMAKNACQTLKKYFETHITMIGETYKTSKN------VVNQLPKYKPLQITPESLEKSFNKIIKNTSDGVATTKEGYFLKKIISLEIPQLLLQLITTTAERKNYEHKNELLVTALDILLALSVFKEIAFSFCQKISI----NAAESSSGMGILLTAIEGSI-EKDIEVRKAALKVLCNCVTSSKSLIQDNTSAITNPQRKNLTESNGTDTTNHYSNHSNNNKVKLIEKIWSSFRXHSNNNKVKLIEKIWSSFRSNNGIMILLRTLEIASPLTEADSIRALVCKALYGIAENKLISQILGRLPMFHNEEIHQLMKEPILSDRITEHNMFTQYASLLLERVTGIPSKTTYNSA-----QASIISQTRITYSQKELLQVVYNHLKKSGLSKAAEVLKDEADLPSTTEDKRTTF-----GTPSITIPKDLCSPSITNEKTPFNNKTFSRTLSTSNTPISSPQTE--RRVLFTPNRRKSIASP--------------------SVFTPQS-----SQSPVVPKQQQYQRPVSPPPPTLDNIITSYLREQHARCANPVATCPPFSLFRPHNCPKPKYRQRASNNITKRLFDRQGNPPQGGQMGCKYTRRFLYSKFRSGVTYRGPGDEEEMYTAGTWMSDSGSMAFGTVAGYVKVVN-YLGQDELAHTAHESAIISIESSKDCKLIATSAEHGPPTGCVWRVVESPVENGLFSLENAFELPEDAYLKFN-NSQDRVIGTNTLTANVYDLGTGQRIGTYHDENNTNNYTKNNACFSPCDNLLLNDGVLWDIRGKQLIHKFDKFNNRVSGIFHPAGREIIIDSEVWDLRTFRLLDTYPELEDCHIRFSGLGDVFYTGKLRAKYFDSYLKNGILGPYESSFRVFDAYDYSALGTVDTKRIIIDVLPDPSDQCLAVLEDDPVM-RFEFDTTCRIYNIGRTK 1331
            ++  ++L  LL++ ++ +      V +  ++S ++E+E   Y   DPDPF ++   R    + +    HLL I+   D+     +    +T RE    LN A  RLL+++ P L  +  F + +  V    +WA++  +PLR+Y+  L+   M      +++ D+  +L  I+++RL+ L          +K P  ++   E            D+G +  D++                      ++ +VN  ++  D G  K    K       RK           P + F       +  +S        +L P+T   +Q LIL++L P+ EYQELLPI ++     L+  YID  +  +  L   AL +L+SLL H KF  EF+   G+QK+LEIP+PS  AT  S+CLYYL YN   +D +ER+C+ PH+ L  +V + L L E SH SG CH+++FFS+ FSF+A+L+LFD  DGLR++VNLISTL+I+ +  +  L SDD+++   +  K+ C  L+KYFE H+ +  E  K S        +V+  P YK    T E + +    +I+     +       FLK    L   QLLLQLI+     K Y  +N+ +  ALD+L  L+V  +I     + + +     +  S+ G+ I+L   EG     D E++K+AL+++ NCV    + I      I+   R+ L ++  +      S H+                          + K+W+  +SNNGI +LL  L I  P+T+AD IRAL CKAL G++ +  + QI+ +LP+F + +I QLMKEP+L D+ ++H  F +YA+ L+ERV+G P     + +     +A +++Q+RI++ +KELL ++ NHL   GL + A VL  EADLP T     + F         +++P+   +P I N          +   S  + P + PQ    +  L  P    +  SP                     V   +S     SQSP + KQ     P    PPTLD+IIT YLREQHARC NPVATCPPFSLF PH CP+PK R++A  N T RL  R   P  GG  G  + R  ++S+FR    +R   ++E  +T   + +    +  GT  G +K+ N + GQ+E ++  H SAI  +E S+D  L+ TSA    P   +W +        +F ++++F   ED Y++F+ +SQDRVIGT    A++YD+ TG ++ T  + +  NNY +N A F+P D+L+LNDGVLWD+R  Q IHKFDKFN  +SG+FHP G E+II++E+WDLRTF LL T P L+ C + F+  G V Y   L+A   D  ++  +  P+ SSFR F+A DY  + T+D KR I D+  D  D  LAV+E+   M     DT CR+Y +GR +
Sbjct:    8 VDSKAELTTLLEQWEKEHGSGQDMVPILTRMSQLIEKETEEYRKGDPDPFDDRHPGR---ADPECMLGHLLRILFKNDDFMNALVNAYVMTSREP--PLNTAACRLLLDIMPGLETAVVFQEKEGIVENLFKWAREADQPLRTYSTGLLGGAMENQDIAANYRDENSQLVAIVLRRLRELQLQEVALRQENKRPSPRKLSSEPLLPLDEEAVDMDYGDMAVDVVDGDQEEASGDMEISFHLDSGHKTSSRVNSTTKPEDGGLKKNKSAKQGDRENFRKAKQKLGFSSSDPDRMFVELSNSSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYIDLKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN---QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRYDGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVKQSLQRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLK----LSCVQLLLQLISIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGISIILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQNPKS------SEHT--------------------------LAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRISFPEKELLLLIRNHLISKGLGETATVLTKEADLPMTAASHSSAFTPVTAAASPVSLPR---TPRIANGIATRLGSHAAVGASAPSAPTAHPQPRPPQGPLALPGPSYAGNSPLIGRISFIRERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLP---SPPTLDSIITEYLREQHARCKNPVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPKYGGVDGGCFDRHLIFSRFRPISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPSRDGSLLLTSATWSQPLSALWGM------KSVFDMKHSFT--EDHYVEFSKHSQDRVIGTKGDIAHIYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDDLMEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDALNMDTVCRLYEVGRQR 1393          
The following BLAST results are available for this feature:
BLAST of TCONS_00051415-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCAF10.000e+033.86DDB1- and CUL4-associated factor 1 OS=Homo sapiens... [more]
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