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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00051424-protein ID=TCONS_00051424-protein|Name=TCONS_00051424-protein|organism=Clytia hemisphaerica|type=polypeptide|length=742bp
MTGANCCITGCSVNRKHKDISIFRIPALSQDIELLKWRRDFIRELRKYRL
FDAAFKARLRKNTVHICARHFREDQLWHYVSKKQIREGELPSINLPDIIK
PRSDEESDSFSSDEEWEMLPPRYCVICYKHVVEKPDRNLVAGHPNILFNV
IDEIAVLPFDVPRRSEYICKKCKDLFQKRHKLRYQISEIDDQIYNLITKD
EKGQEKATDKQNTDTQPNDEPKTEAEKLIDKIKRSGKDAQKINTENMHDY
CQDKKATGTTSIHISKASIAASLKTTNNEKTNAIVNKVSSSTTNEDSSTT
NTPIQSSAQSNKRKISLTELHQEIANKRQQQTIAPLPSVSALQPPKFEVP
KFYRKKNPHRTPSPPPMETTPPSFPRIVDYRSLSYSNFITPVRIVSKTVN
QPSVGGLIIAPKPTSQIKAPKIVNQVIASKPPETFNSKPITKAPSTAQVP
SSKTSNQTYFVPKIQQIVNTVAINKPQTSSNTTTPTTATSAKPKKHRHMM
TQTNPLSMNDQKYPWLNDVGTNAYVVAKWPSSLKYKRCTRDTTSIAIALL
RGVHADMARRIWNHEKLKSFILELLIKDIVKECDKYCHDKTPSILRKTYP
EDFVHFTYEKLDAELKEHCPMLREIVRRVTTKRSGVPQEEKSFLSHTCMS
ISLIIKHRQPRMWALQKMLDMLEDGEKKGLPRCLLEQRYIFLPPDIGLPS
PKQPSSENTGSEGPMPNGDIEMEEPNKAENRKIDKGLITVST Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR006612 | Znf_C2CH |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR006612 | Zinc finger, C2CH-type | SMART | SM00980 | THAP_2 | coord: 4..100
e-value: 0.0098
score: 22.4 |
| IPR006612 | Zinc finger, C2CH-type | PFAM | PF05485 | THAP | coord: 6..94
e-value: 1.3E-6
score: 29.2 |
| IPR006612 | Zinc finger, C2CH-type | PROSITE | PS50950 | ZF_THAP | coord: 1..94
score: 14.319 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 353..373 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 475..497 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 695..742 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 434..454 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 202..225 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 288..313 |
| None | No IPR available | SUPERFAMILY | 57716 | Glucocorticoid receptor-like (DNA-binding domain) | coord: 5..96 |
Blast
The following BLAST results are available for this feature:
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