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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00051536-protein ID=TCONS_00051536-protein|Name=TCONS_00051536-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2266bp
MAEQEEPDGFAVVEILGTTIKHGKRHYKVRWADSWEPEENLAGCPQMIED
FWKKNKSEKRSKGSITRNKRKRTRQLRGDTPPASPPPNHNDTDSSDESDD
SDDQPLGKTNKRKQRTKKNKRPRVESTSSSGDARQQGGEERAEENSLDNE
ITENTTSLGNSNQQEKLQAPMIGFGDQETSTDMNIDNEPTFDDTGEPPPI
EEINAPNSSTTQRPTTPSISPVDNNIQPPPIEEINAGAPQIHYQKETSKD
GNEEEEPTMQQLAQISNDSLLPLDTPVCQASSFRVKDASPNSTSAQKTEN
QPPFATTTAATSTSTTFSSLTRANQRLAASNNRQNCIDVDEVYTDDVTSK
ILEEKIVVVKKEPLSEPEDEELSFKRTAKIKAGFTIRKLAEKELDTQESS
DSNEEDEYVQQPEEDDQDDDDISADDSNGTNRREEQQRVNSAMPTSSFQS
AMETLLTLNVTTVQSQQHQRISSFTNTKAPTTTTITSFRCPTGAITNTFA
SIRPTLITSTTSCGSASTIVSFQSRPLPVPKGPVPDDNPEMARTFERFQK
WSQFQQKELLTVSIKAVAKQVFTSKETSDGSIKTRINNWLTDRIRKKFGR
QPGNAILNHPTYSQIVDNLAAKVFEAVKHIFKQSGSSDQKQDQGPQLVAL
SSGSNVPQPRPSNLQQPQGSHQRHPLPNILRPRQPPTPPAQHQTQQPQQH
PISQLQQLSQQPRSVAMCPIPIAVDPQLPPYDLNDPQTQMQSQVMHRFAS
VHQQMNLQHLYTDPRLIPGSQPALYHNAHFQPIPGARPIGPIHSQQQPIQ
SIGIRMGQTSIRAQQPRLTHLNIQQPSQSGIRVGLSPDGTQQRVRYPGVF
PTQQRNIQTSQIVTGTNQHSRENNPQRINASIASQQPNRHQVNIMRGTHP
TSPPANQQLPRPSFSAVRHPSPPSGGSNQQQLIHQNQQQLPQRTQFSSTN
HAQLPQRTQYSSANHAQQRHPFPPLTNNPQNSRSSVYTQGPTSMIKTARP
QGSAQFNQRLPTQQNQNQNRFPRPNPQQAQVVQQQTHFHPRVVNFGKLHS
FRINDLMGELTNLSTESQSSTHQSSQAVQPVQNITQDQRSPQSFQQQPPT
MFNRTPTSQIVTSQKSLQKQPLESLNQRVQPVPAQILQHVTPTSKSQAPS
SSTQQTPPVTSQQAPTATTVITNQQTFQPPSTSSLPTIAATIVSESQQQS
SSTTTSTGPRIKHTNPTASIKRYIPRKSFKGPALSFQDRQYEAGEMTPAL
RDDFMIPSIPPISLPEMPEEEDNPLEFSDIVSPSSPRANDIPIDTSCSNE
KKTTPEKQESKDPGEPVMAMETNSANLDDIETDLTDQTDNTTAPTVASQS
PSKPQSKDPEATPMSQELESSSINDKDTATILASDSQLSSSEESQCMDEP
IQSPGQPPIMAMEIDESESDFSSGKTNDVVNSTVIDNELLTKSKDSDTEM
PENKTADICSTIEESNKDRNIHSDTEMSENTTQESSANTSSATEESNKTD
KDLSIGASEPKPSSPKASESNKDDCRKDEKELLEESKATEDDETEITDQE
ALAIAGCLGLDPSDNSPEPDNEIQGTKRVDQETEGVDQETEGADQASERK
DQVTEGVDQTDSPKDDSDEEITIINSKSTPVPERKPPPERVGGSGLSFTA
EEEDVPHSVTSYIKRHYQSILDMVGDKRSSLGPKLHLHSDGSIEISLKEG
GYIRIRYKDLVRADHERKARLRQTANTTAGSALRAQNAVVLIDESTTSAT
TDNTGKLGGSKETMSDSTQPDTSRKTNMESKRFGPGLIKKEKSPNRNTEK
NETLLITQTGNSNDSTSTTHSINTVTKGDTNNKNRSVNIESDNTSTTIKD
KTGIKTSNKSDENFTAKQTQNLDKMNENLSTRNDIKDNERTQNMLDDIDV
TKISKQENLKFDIKGSSTSQNSNEVNLAINTSKDTLKSNDESSTKSGGSN
SLSNETPSNTDNSDSAPEHRKVDKKDSSKGIFSKDETKNSTANHSGSDIK
NKDHTSMDERIIKENLNELNDSPVMNENELLDFDDSDGNDEDMDDKLLTE
DQLLGNDDEDEDGVEMTSSTVQSDTSKPEKSENLNIEKKDFVSKTEITKS
CQETTEVDTGIRITRIIDTEVKKSAVAASTGELSSNSSKSIAQGSGTIES
SNKELNRTNMDTPGSKATEQKLDSKTMNNTRVDSLDLDFETDQIASSPNL
KSWEPNLNIDSTPTKNQSDVNKNIQSDSSKFDHVTSRNQSERSKSVDRNK
QSSTSSKFKGVNLPFL Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000953 | Chromo/chromo_shadow_dom |
| IPR016197 | Chromodomain-like |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000953 | Chromo/chromo shadow domain | SMART | SM00298 | chromo_7 | coord: 9..56
e-value: 9.4E-7
score: 38.4 |
| IPR000953 | Chromo/chromo shadow domain | PROSITE | PS50013 | CHROMO_2 | coord: 10..63
score: 11.309 |
| None | No IPR available | GENE3D | 2.40.50.40 | | coord: 1..65
e-value: 4.2E-12
score: 45.2 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 53..261 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 633..711 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1063..1124 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1262..1654 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 2196..2266 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1140..1166 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1931..2088 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 849..873 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 392..447 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 894..946 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 281..317 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1749..1839 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1193..1216 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 958..1035 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 2128..2179 |
| None | No IPR available | CDD | cd00024 | CHROMO | coord: 10..54
e-value: 6.40068E-8
score: 51.1107 |
| IPR016197 | Chromo domain-like | SUPERFAMILY | 54160 | Chromo domain-like | coord: 4..57 |
Blast
The following BLAST results are available for this feature:
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