TCONS_00051839-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051839-protein
Unique NameTCONS_00051839-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length302

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051839-protein ID=TCONS_00051839-protein|Name=TCONS_00051839-protein|organism=Clytia hemisphaerica|type=polypeptide|length=302bp
MQSNFILPTIESIYSNKYNNSQSSSLNTKSKFFQSNMASGSNGGSSNELS
NVPQVIELNVGGHYYTTTLSTLLFESGSLLTSMFTGNIRVSKDSRGRYFI
DRDGALFRYVLDYLRNDGLTLPKKFEEADRLLVEAEYFRLKGLCKLLKKP
TRKDPRGPTSRTSGFITLCVRGTYAFGRDGIADIKFRKLQRIXCVRGTYA
FGRDGIADIKFRKLQRILVCGNVGLSREVFSDTLNETRDPDRKTDCYSSR
FYLKHPHLEMAFDRLHESNFKMVTSAAGGAGYDPESEETKWNHFTNYVFF
RE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032813XLOC_032813Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051839TCONS_00051839Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR003131T1-type_BTB
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0051260protein homooligomerization
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051260 protein homooligomerization
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 54..155
e-value: 5.2E-6
score: 36.0
NoneNo IPR availableGENE3D3.30.710.10coord: 53..154
e-value: 1.9E-27
score: 94.8
IPR003131Potassium channel tetramerisation-type BTB domainPFAMPF02214BTB_2coord: 56..143
e-value: 8.0E-17
score: 61.3
IPR011333SKP1/BTB/POZ domainSUPERFAMILY54695POZ domaincoord: 54..149

Blast
[Close]
BLAST of TCONS_00051839-protein vs. Swiss-Prot (Human)
Match: KCD16 (BTB/POZ domain-containing protein KCTD16 OS=Homo sapiens GN=KCTD16 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.196e-58
Identity = 121/282 (42.91%), Postives = 154/282 (54.61%), Query Frame = 0 
Query:   53 PQVIELNVGGHYYTTTLSTLLFESGSLLTSMF-----TGNIRVSKDSRGRYFIDRDGALFRYVLDYLRNDGLTLPKKFEEADRLLVEAEYFRLKGLCKLL------KKP----------------TRKDPRG---PTSRTSGFITLCVRGTYAFGRDGIADIKFRKLQRIXCVRGTYAFGRDGIADIKFRKLQRILVCGNVGLSREVFSDTLNETRDPDRKTDCYSSRFYLKHPHLEMAFDRLHESNFKMVT--SAAGGAGYDPESEETKWNHFTNYVFFRE 302
            P+V+ELNVGG  Y T  STL+    SLL  MF     T N  ++KDS+GR+FIDRDG LFRY+LDYLR+  + LP  F E  RL  EAEYF+L  L KLL      + P                TR  P     P  R  GFIT+  RG+   GR+                         G AD KFR++ RILVCG + L++EVF +TLNE+RDPDR  + Y+SRFYLK  HLE AFD L E  F MV   S+   +  +  +++  W+ +T YVF+RE
Sbjct:   24 PEVVELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRDTAN-DLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYFQLPDLVKLLTPDEIKQSPDEFCHSDFEDASQGSDTRICPPSSLLPADRKWGFITVGYRGSCTLGRE-------------------------GQADAKFRRVPRILVCGRISLAKEVFGETLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSVTASFINQYTDDKIWSSYTEYVFYRE 279
The following BLAST results are available for this feature:
BLAST of TCONS_00051839-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCD161.196e-5842.91BTB/POZ domain-containing protein KCTD16 OS=Homo s... [more]
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