TCONS_00051859-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00051859-protein
Unique Name	TCONS_00051859-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	477

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00051859-protein ID=TCONS_00051859-protein|Name=TCONS_00051859-protein|organism=Clytia hemisphaerica|type=polypeptide|length=477bp
FSSDNTLRHGVFLIRNKQAFSCSERSEQKIVVLKTDMSENEDEYQEFTNY
NSSTIIRKRYEITEKTGDPDRDYINAPIDALGPPGRWIRHKLLESILYGT
PVLVAIQQLRTKKFTKIMKFASILGTEEFYAVLLCFLTWIVDLRLGRLAS
IAMGIGFYVANAVKNAFCLPRPPSPPVRPLEDAYYTWGLPSHHSVLAVIC
PWYIWFYVLQHYHFQVTTLVCLFSFITLWSFMVMLCRIYNGVHSPADVVT
GSLLGVMIVAFMNRFDNEIDLSSVMNGQSALILPIWLAILLILHPFNDVG
IPAFEETNSMASCSVGIMLGKAFSHGKSPHFKALLETYIPGETSIFKAIL
FGFLRYLIGVIFVVLAKEVSKFLTNLVISTFCKIFKINYIKKSPRSKFYT
GYTENYLLPPIYKDRKRGEDDDDVDDGVMEEKSATTSTTKEEVWNIGHYS
RFVSYMCMGFVAYYCNNLFYQYVGLVL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_032820	XLOC_032820	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00051859	TCONS_00051859	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000326	P_Acid_Pase_2/haloperoxidase

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000326	Phosphatidic acid phosphatase type 2/haloperoxidase	SMART	SM00014	acid_phosph_2	coord: 145..263 e-value: 0.0019 score: 25.0
IPR000326	Phosphatidic acid phosphatase type 2/haloperoxidase	PFAM	PF01569	PAP2	coord: 150..266 e-value: 8.1E-17 score: 61.2
IPR000326	Phosphatidic acid phosphatase type 2/haloperoxidase	GENE3D	1.20.144.10		coord: 25..271 e-value: 1.5E-21 score: 76.5
IPR000326	Phosphatidic acid phosphatase type 2/haloperoxidase	SUPERFAMILY	48317	Acid phosphatase/Vanadium-dependent haloperoxidase	coord: 98..265

Blast

[Close]

BLAST of TCONS_00051859-protein vs. Swiss-Prot (Human)
Match: SGPP1 (Sphingosine-1-phosphate phosphatase 1 OS=Homo sapiens GN=SGPP1 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.370e-18
Identity = 81/272 (29.78%), Postives = 126/272 (46.32%), Query Frame = 0

Query:  120 FASILGTEEFYAVLLCFLTWIVDLRLGRLASIAMGIGFYVANAVKNAFCLPRPPSPPVRPLEDAYYT-WGLPSHHSVLAVICPWYIWFYVLQHYHFQVTTLVCLFSFITLWSFMVMLCRIYNGVHSPADVVTGSLLGVMIVAFMNRFDNEIDLSSVMNGQSALILPIWLAILLILHPFN-DVGIPAFEETNSMASCSVGIMLGKAFSHGKSPHFKALLETYIPGETSIFKAILFG--FLRYLIGVIFVVLAKEVSKFLTNLVISTFCKIFKI 387
            F + LG E FY +   F  W +D  +GR   +   +  Y+    K+    PRP SPPV  LE  Y + + +PS H++     P  I   +L +  +Q   +  L   I  W  +V L RIY G+HS  D++ G L  ++I+A    F + ID  +  +  +  I+ I L + L +  F  D    +  +T  +     GI  G   ++         L+T +P         LFG   LR LIG++FV++ ++V K +T   I   CKIF I
Sbjct:  134 FGTELGNELFYILFFPFWIWNLDPLVGRRLVVIWVLVMYLGQCTKDIIRWPRPASPPVVKLEVFYNSEYSMPSTHAMSGTAIP--ISMVLLTYGRWQYPLIYGLI-LIPCWCSLVCLSRIYMGMHSILDIIAGFLYTILILAVFYPFVDLIDNFNQTHKYAPFII-IGLHLALGIFSFTLDTWSTSRGDTAEILGSGAGIACGSHVTYNMGLVLDPSLDT-LPLAGPPITVTLFGKAILRILIGMVFVLIIRDVMKKIT---IPLACKIFNI 397

The following BLAST results are available for this feature:

BLAST of TCONS_00051859-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00051859-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SGPP1	1.370e-18	29.78	Sphingosine-1-phosphate phosphatase 1 OS=Homo sapi...	[more]

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TCONS_00051859-protein (polypeptide) - C. hemisphaerica