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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00051917-protein ID=TCONS_00051917-protein|Name=TCONS_00051917-protein|organism=Clytia hemisphaerica|type=polypeptide|length=571bp
MRTSIFIFCLLFGVIFAKSCLDEVKELEAKPPMVGAYKPICQTNGLYAET
QYHASYYFCVNPKTGEKILGTDVRFRKPSSCKTTPCMLQRHQGMLNSKQG
MVGHFTPQCEEDGSFKKVQCHASTGFCYCVVPETGAKVVGTEVRGKLTNC
EATGVNNAKTCLNHLQELDAKPALLGAFRPVCQANGLYAETQCHGSTGFC
FCVVPETGKKILGTEIRGKPKSCKATPCMLQRHQGMLKSQKMMVGHFTPQ
CEEDGSFKKVQCHGSTGYCFCVAADTGVKVEGTEVRGKPTNCETADNADK
PCLKQLNELQAKQPLLGQFKPKCQANGMFAEMQSHAGYHYCVFPKTGEEI
KGTRIRFAQPKTCKATPCLIQRHHAMKDSDRGMVGQFTPQCETDGSFTVT
QCHSSTGFCFCVVPETGEKLLGTELRFKKPKNCEMTECMHERHQALKSGL
LGIFKPACDEDGLYSNVQCTEGICYCVFAKTGAKVLGTELERGVRPTTCE
LTKCFKKRHEFLSQTQPLLGARKPVCTADGNFNPVQCHEGVCHCVFPTTG
EEVLGTMTRFRKPQSCKLTRK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000716 | Thyroglobulin_1 |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000716 | Thyroglobulin type-1 | SMART | SM00211 | TY_2 | coord: 320..367
e-value: 2.7E-4
score: 30.3
coord: 106..154
e-value: 7.4E-11
score: 52.1
coord: 455..503
e-value: 2.8E-8
score: 43.5
coord: 248..296
e-value: 1.2E-12
score: 58.0
coord: 38..85
e-value: 4.9E-4
score: 29.4
coord: 388..437
e-value: 6.7E-10
score: 48.9
coord: 523..570
e-value: 4.8E-9
score: 46.1
coord: 179..227
e-value: 3.8E-12
score: 56.4 |
| IPR000716 | Thyroglobulin type-1 | PFAM | PF00086 | Thyroglobulin_1 | coord: 372..430
e-value: 2.5E-11
score: 43.0
coord: 444..492
e-value: 3.8E-10
score: 39.2
coord: 237..292
e-value: 1.3E-13
score: 50.2
coord: 26..78
e-value: 4.3E-6
score: 26.2
coord: 305..361
e-value: 1.3E-8
score: 34.2
coord: 506..564
e-value: 9.7E-10
score: 37.9
coord: 90..150
e-value: 5.7E-13
score: 48.2
coord: 166..223
e-value: 8.1E-12
score: 44.5 |
| IPR000716 | Thyroglobulin type-1 | GENE3D | 4.10.800.10 | | coord: 153..223
e-value: 4.6E-13
score: 48.4
coord: 16..81
e-value: 2.1E-7
score: 30.3
coord: 295..363
e-value: 1.3E-9
score: 37.3 |
| IPR000716 | Thyroglobulin type-1 | GENE3D | 4.10.800.10 | | coord: 83..152
e-value: 3.3E-15
score: 55.2
coord: 365..435
e-value: 1.5E-12
score: 46.7
coord: 436..500
e-value: 1.7E-12
score: 46.5
coord: 225..294
e-value: 1.1E-17
score: 63.2
coord: 501..569
e-value: 1.2E-12
score: 47.0 |
| IPR000716 | Thyroglobulin type-1 | PROSITE | PS00484 | THYROGLOBULIN_1_1 | coord: 454..482 |
| IPR000716 | Thyroglobulin type-1 | PROSITE | PS00484 | THYROGLOBULIN_1_1 | coord: 105..135 |
| IPR000716 | Thyroglobulin type-1 | PROSITE | PS00484 | THYROGLOBULIN_1_1 | coord: 247..277 |
| IPR000716 | Thyroglobulin type-1 | PROSITE | PS00484 | THYROGLOBULIN_1_1 | coord: 387..417 |
| IPR000716 | Thyroglobulin type-1 | PROSITE | PS51162 | THYROGLOBULIN_1_2 | coord: 17..81
score: 7.659 |
| IPR000716 | Thyroglobulin type-1 | PROSITE | PS51162 | THYROGLOBULIN_1_2 | coord: 158..223
score: 10.1 |
| IPR000716 | Thyroglobulin type-1 | PROSITE | PS51162 | THYROGLOBULIN_1_2 | coord: 83..150
score: 10.74 |
| IPR000716 | Thyroglobulin type-1 | PROSITE | PS51162 | THYROGLOBULIN_1_2 | coord: 299..363
score: 8.16 |
| IPR000716 | Thyroglobulin type-1 | PROSITE | PS51162 | THYROGLOBULIN_1_2 | coord: 435..499
score: 9.994 |
| IPR000716 | Thyroglobulin type-1 | PROSITE | PS51162 | THYROGLOBULIN_1_2 | coord: 365..433
score: 10.219 |
| IPR000716 | Thyroglobulin type-1 | PROSITE | PS51162 | THYROGLOBULIN_1_2 | coord: 225..292
score: 11.129 |
| IPR000716 | Thyroglobulin type-1 | PROSITE | PS51162 | THYROGLOBULIN_1_2 | coord: 501..566
score: 8.958 |
| IPR000716 | Thyroglobulin type-1 | SUPERFAMILY | 57610 | Thyroglobulin type-1 domain | coord: 433..500 |
| IPR000716 | Thyroglobulin type-1 | SUPERFAMILY | 57610 | Thyroglobulin type-1 domain | coord: 27..82 |
| IPR000716 | Thyroglobulin type-1 | SUPERFAMILY | 57610 | Thyroglobulin type-1 domain | coord: 363..435 |
| IPR000716 | Thyroglobulin type-1 | SUPERFAMILY | 57610 | Thyroglobulin type-1 domain | coord: 167..224 |
| IPR000716 | Thyroglobulin type-1 | SUPERFAMILY | 57610 | Thyroglobulin type-1 domain | coord: 228..294 |
| IPR000716 | Thyroglobulin type-1 | SUPERFAMILY | 57610 | Thyroglobulin type-1 domain | coord: 81..151 |
| IPR000716 | Thyroglobulin type-1 | SUPERFAMILY | 57610 | Thyroglobulin type-1 domain | coord: 308..363 |
| IPR000716 | Thyroglobulin type-1 | SUPERFAMILY | 57610 | Thyroglobulin type-1 domain | coord: 504..566 |
| None | No IPR available | CDD | cd00191 | TY | coord: 227..292
e-value: 3.64652E-14
score: 67.1037 |
| None | No IPR available | CDD | cd00191 | TY | coord: 301..361
e-value: 2.34836E-6
score: 44.3769 |
| None | No IPR available | CDD | cd00191 | TY | coord: 503..564
e-value: 1.23011E-8
score: 51.3105 |
| None | No IPR available | CDD | cd00191 | TY | coord: 367..431
e-value: 8.81042E-11
score: 57.4737 |
| None | No IPR available | CDD | cd00191 | TY | coord: 85..150
e-value: 3.54126E-12
score: 61.3257 |
| None | No IPR available | CDD | cd00191 | TY | coord: 164..223
e-value: 3.68056E-12
score: 61.3257 |
| None | No IPR available | CDD | cd00191 | TY | coord: 438..493
e-value: 2.87185E-7
score: 47.0733 |
Blast
BLAST of TCONS_00051917-protein vs. Swiss-Prot (Human)
Match: SMOC1 (SPARC-related modular calcium-binding protein 1 OS=Homo sapiens GN=SMOC1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.739e-26 Identity = 85/266 (31.95%), Postives = 126/266 (47.37%), Query Frame = 0
Query: 38 KPICQTNGLYAETQYHASYYFCVNPKTGEKILGTDVRFRKPSSCKT---TPCMLQRHQGMLNSKQGMVGHFTPQCEEDGSFKKVQCHASTGFCYCVVPETGAKVVGTEVRGKLTNCEATGVNNAKTCLNHLQELD-AKPALLGAFRPVCQANGLYAETQCHGSTGFCFCVVPETGKKILGTEIRGKPKSCKATPCMLQRHQGMLKSQKM-MVGHFTPQCEEDGSFKKVQCHGSTGYCFCVAADTGVKVEGTEVRGKPTNCETADNA 298
KPIC ++G E+ C +P LG R R CK + C L+R Q + +K+ F P+C EDGSF +VQCH TG+C+CV P+ G + G+ V+ K C + + + N ++ D +KP +PV + + A T V+ ++ K+ T IR S K C +R + ++Q+ G P+C G +K VQCH STGYC+CV DTG + GT R +CE+ A
Sbjct: 53 KPICASDGRSYESMCEYQRAKCRDP-----TLGVVHRGR----CKDAGQSKCRLERAQALEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPD-GKPISGSSVQNKTPVCSGSVTDKPLSQGNSGRKDDGSKPTPTMETQPVFDGDEITAPT-----LWIKHLVIKDS--KLNNTNIRN---SEKVYSCDQERQSALEEAQQNPREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYVMPSCESDARA 298 HSP 2 Score: 103.99 bits (258), Expect = 7.830e-24 Identity = 79/259 (30.50%), Postives = 125/259 (48.26%), Query Frame = 0
Query: 179 RPVCQANGLYAETQCHGSTGFCFCVVPETGKKILGTEIRGKPKSCKATPCMLQRHQGMLKSQKMMVGHFTPQCEEDGSFKKVQCHGSTGYCFCVAADTGVKVEGTEVRGKPTNCETADNADKPCLKQLNELQAKQPLLGQFKPKCQANGMF--AEMQSHAGYHYCVFPKTGEEIKGTRIRFAQPKTCKATPCLIQRHHAMKDSDRG-MVGQFTPQCETDGSFTVTQCHSSTGFCFCVVPETGEKLLGTELRFKKPKNCE 434
+P+C ++G E+ C C LG RG+ K + C L+R Q + +++K F P+C EDGSF +VQCH TGYC+CV D G + G+ V+ K C + DKP L Q N ++ + P + +F E+ + + + K ++ T IR ++ K C +R A++++ + G P+C G + QCH STG+C+CV+ +TG L GT R+ P +CE
Sbjct: 53 KPICASDGRSYESMCEYQRAKCR-------DPTLGVVHRGRCKDAGQSKCRLERAQALEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPD-GKPISGSSVQNKTPVC-SGSVTDKP-LSQGN--SGRKDDGSKPTPTMETQPVFDGDEITAPTLWIKHLVIKDS-KLNNTNIRNSE----KVYSCDQERQSALEEAQQNPREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYVMP-SCE 293
The following BLAST results are available for this feature:
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