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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00051925-protein ID=TCONS_00051925-protein|Name=TCONS_00051925-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2030bp
MVRNRYLLFLVLVALQCVVTIQGQPNAKKPLSETFISSLHLDEGNIDNQD
DPQIQNLRKARSAIQENGVRYARHIEQKVNDDARMLEKLSKLFEEIDDDT
GNVNKRSIDVGGSKMSKEGKALHRKSLHDLSNARSKTLLHDQSSLISQPR
KTSNEKKKTKKNDVVLISKNAEQSNKITRSINGIRKKNKLPKSKQEQNVP
ESNNQRSVDQEIKTSSLPSGKAVKREVRHVIKTHEQNKTNDVSSKNLHEK
SHKPTRESGTINPLKTKDIKERKKSSKVPTNNDYSSLFHNKVKRSIDEDE
EEMTIRKDDDKTKGNEKEIHGLPEALATIFDIKKFKREIKEEEHKQTEDK
KEHQRYNPRAVILKRQARDRVVPNIPLPFLKSPITKVRRFVKKIQLAEKV
GQPQDKHNQEPIRKSKVITVKSKNKTENRTQRKTIIVAPNILSSIIKQQE
VKQEPVGKIGSIGDEQTATLSKKNQTSTEGDKQVERASRSVSEESIDSTK
GKKIISTQRNELYGKTIPFEELKSLDIVRRALTDEQFNRLRFLDDQKAKS
LFESDENKFLKNLTKDGIYYDTRNKRFILSADASRLAEFTKNVTLKDSTE
ELAILKNNITKREIILDSDPDIVTKMGGKEAKMEQDAIKKAEEVYRFARQ
ILDIVGDEPKKKSKRETGEEPEHKKSNGIMGMWTALGSSPEFVPELVKRD
TSTPSHHAARKMSLDEIRQKRQEFNSKKRRALIALDDNERHQINQRHAES
PLSIAETGNLGSVNLREVRKDTITDEHVEQSHEKSKRQANNAERDINKNS
AATLSNDGKVIFAFDEVKELMPSRKISTVEEASLLKPQTLTETRYDLDRD
LADSMLIGRQIIPAHPIDATLVSSSFSTNGDSYGTSKNKIPILKKQNQLG
PAQFSKYRSDYEKPRVEQMQRWVNETMFHPYGTERSAETDAALQKLNLAS
LNATAVYPSYRDNKGETSSQYLAHNLQDKIKLDDSSNEVGIDELNRDILK
EQEKYKMHLEQQHQQRLEEQQRKLPPNGDDSETQSQSTEILNRLANQPTP
IPLQQLPTVSNKQSETESELEHYERVHGLNMANKTELSTTNAPPTPTTST
STQPPTTRTTSTTTTPKTTTLATTTSSTQKTTTQQPATTTTNTLKTTTAT
TATTTSSPTTSTLSSTTRNLTTTAIPTSTTPTTTPANTKNSNLTTDSTNA
SNTTTNLVSNATTPEEKNKTVNRMNVAEEQPQQTQPIPQQTSSTPCCLQV
QPYTQVPCDQQNAQPCQQQFSQPTPQQMQPEAQQAQQYLNSWQQQAASGA
ITPTPYPSPQTPPVLPATTLTTEQQQQQYLTTATPLPYPLDSDYEMELPR
NKSAPEIIPRSDGYIGCYVDRLVDGRDLPIRAGVPSVTPNNCRSVCKKSG
YRYAAMQYGYLCFCGNSYGKYDMVPDSECNTMCSGDDAYTCGGLWRNKIY
NTEGVDEGKEKSYKDENGVARSYLPVTPDIPTTSNTDSPPVNPYKPTPDI
QEALKAAEEKDVNNYQNQIQANLRLQNIADGNYKDVNDQHQPISDNKWIE
LAQQKVKETLSQQKHPTRKSKEQLLKEYIRTHATDDFKELKHSPPNIINA
TPGTKIYRGLIKLQQLWYDDFANTSSAKFQILTGNIQIALKRIYENDTNF
ISAEVVSLMEADQFMPHRTIVDFVLNFKTDNIGTPLTEDPTHHLFQVVST
TKSLDGMPVLPKTLTIKEYYLSQGGNDINTQAQQSPAKAPLSPNQFERIK
HDSIFYPPTPYHNKQSPWDTVIRSQLSHIQEAPFLFQQQSQQVDASRQEV
PGIGTGSWTMQKPIQEQPLTGNGLPDQKPVRTYIKPAVTSNNNIAELKNY
MEYQKLAPSNLGNKRNLTADIMAKKSLEVPGKENSQYKLRLFFWKDMLAR
RKRDEKPTTKSQIKFNVYKRKLNQNTNTNIKDSVSIIRSKRSQADDHWPI
TYKGDSQKKTYKQSAPNGVTLKRKKRLTLDREEDKNGFATLFNELHFDEK
DMVKSDKRRMVTTMNGKEEILHRSKRTEDV Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 782..802 |
| None | No IPR available | COILS | Coil | Coil | coord: 332..352 |
| None | No IPR available | COILS | Coil | Coil | coord: 991..1011 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1269..1313 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 138..285 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1008..1217 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 773..801 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1473..1493 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 103..124 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 457..500 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 656..680 |
| IPR002889 | Carbohydrate-binding WSC | SMART | SM00321 | SLG_2 | coord: 1361..1453
e-value: 5.6E-7
score: 39.2 |
| IPR002889 | Carbohydrate-binding WSC | PFAM | PF01822 | WSC | coord: 1364..1443
e-value: 2.9E-17
score: 62.5 |
| IPR002889 | Carbohydrate-binding WSC | PROSITE | PS51212 | WSC | coord: 1361..1453
score: 10.584 |
| IPR000082 | SEA domain | PFAM | PF01390 | SEA | coord: 1607..1682
e-value: 1.5E-8
score: 34.7 |
| IPR000082 | SEA domain | PROSITE | PS50024 | SEA | coord: 1603..1721
score: 9.68 |
Blast
The following BLAST results are available for this feature:
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