TCONS_00051929-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00051929-protein
Unique Name	TCONS_00051929-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	415

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00051929-protein ID=TCONS_00051929-protein|Name=TCONS_00051929-protein|organism=Clytia hemisphaerica|type=polypeptide|length=415bp
MEIIQLFKSLLSRFIFLLHGVVSAYLIVQNNEEPRYWACTIPVFLLIFEA
AYTLIVRKGQEFTYFWPSGLLYILTMIPIIWAIELELLDERIEEENRVPV
PLFILPVPTATLNGSKAPPVTPKPLSINISNEVIGKKVGELGIIIGLITG
RWLMPRGSMTRDQLSALLLGYVGNAADILELFETFEEDDVKTSRSLTLAV
IAIYTWAILQFTLVTTATLKDKKDLEEDLEKQIQPPKKNQIAPTRKISGT
EIHRDKHVQKKYIEDVRTRKVSVENREHRGRGRKISTTKSPTESKHKAIN
SESSVQMNERTRRRELHGEVFQILVTLMMQDGPFLVLRLYLIIQYNVVSE
MHIFFTCKNAIVSVLLVYRLLILTCRGEDIETDLYREEAAAKLHNVQLAI
MATHIEEETHNIRVQ

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_032862	XLOC_032862	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00051929	TCONS_00051929	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019169	Transmembrane_26

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019169	Transmembrane protein 26	PFAM	PF09772	Tmem26	coord: 296..369 e-value: 1.3E-20 score: 73.8 coord: 3..231 e-value: 1.2E-63 score: 215.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..311

Blast

[Close]

BLAST of TCONS_00051929-protein vs. Swiss-Prot (Human)
Match: TMM26 (Transmembrane protein 26 OS=Homo sapiens GN=TMEM26 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.228e-30
Identity = 83/235 (35.32%), Postives = 129/235 (54.89%), Query Frame = 0

Query:    1 MEIIQLFKSLLSRFIFLLHGVVSAYLIVQNNEEPRYWACTIPVFLLIFEAAYTLIVRKGQEFTYFWPSGLLYILTMIPIIWAIELELLDE--------------RIEEENRVPVPLFILPVPTATLNGSKAPPV--TPKPLSINISNEVIGKKVGELGI----IIGLITGRWLMP-RGSMTRDQLSALLLGYVGNAADILEL-FETFEEDDVKTSRSLTLAVIAIYTWAILQFTL 213
            ME +    +L +R +FLLH +V  + + +  +EPRYW   +   LL  E A TL  ++G+ + +F P+  LY+++++P +W +EL    +              R E+ N+           T+    S+A  +  T K    N+S   + +KV  LG+    ++ LI GRWL+P  G +TRDQLS LLL +VG AADILE   ET EE +V+ S +L  A++ I+TW++LQF L
Sbjct:    1 MEGLVFLNALATRLLFLLHSLVGVWRVTEVKKEPRYWLLALLNLLLFLETALTLKFKRGRGYKWFSPAIFLYLISIVPSLWLLELHHETQYCSIQAEGTSQNTSRKEDFNQTL---------TSNEQTSRADDLIETAKVFVNNLST--VCEKVWTLGLHQTFLLMLIIGRWLLPIGGGITRDQLSQLLLMFVGTAADILEFTSETLEEQNVRNSPALVYAILVIWTWSMLQFPL 224

The following BLAST results are available for this feature:

BLAST of TCONS_00051929-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00051929-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TMM26	2.228e-30	35.32	Transmembrane protein 26 OS=Homo sapiens GN=TMEM26...	[more]

You are here

TCONS_00051929-protein (polypeptide) - C. hemisphaerica