TCONS_00051946-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00051946-protein
Unique Name	TCONS_00051946-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	662

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00051946-protein ID=TCONS_00051946-protein|Name=TCONS_00051946-protein|organism=Clytia hemisphaerica|type=polypeptide|length=662bp
MSFTALTSLWFSVVFRRKKINPKSTTAQQTLSKCLSTSQLIHLGIGATLG
AGTYVVTGQVAANIAGPAVVISFTIAALTSILSGLCYAEFGSRVPQTTGS
AYTYSYVTVGEIWAFFIGWNLILEYMIGTAADAAALSGSFDYAIGFHVRN
WTLENIGAFNTPYLGDYPDILSFVFTIIVTIVLAFGVRESARFTVMFNIF
NIIVVIFIIVVGLFYIEPTNWTKGKGFFPYGASGVLSGAATCFYAFVGFD
IIATTGEEATNPSKSIPIAIVASLVIIFTCYFGVSTVITMMIPYDELDKL
SPIPAAFAQRGLGWAHYVISIGAICGLSSSLLGNLFPLPRIIYAMARDGL
LFNMFTKIHEKTEVPVNATIYPGIMTAFFALLFDLEELVEMMSIGTLLAY
TLVSLCVLILRYQPDEYYGDNSIMKPLVADDGSTIGSEDDDNEAQYGRTP
SVTPRVSGDEKNMLETSFNENFLQLPEQKQGGHTYSPTHNPDSAENEEEE
NEQKLKEFKQINDGTYTPMQNDQYPGRREPTLATGRAVTCACLCLFLWFF
GFNSIILFAFDQLVRKEIWTITLLIIFGTLIIASVAVIYSMPQSSTKYGF
MAPCVPALPILAIYANTFLMLKLSTITWVRFGVWMVIGILLYAFYGTFNS
KVDKETNDEENR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_032877	XLOC_032877	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00051946	TCONS_00051946	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002293	AA/rel_permease1
IPR029485	CAT_C
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0015171	amino acid transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0003333	amino acid transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0003333	amino acid transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0015171	amino acid transmembrane transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 494..514
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 479..528
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 432..458
IPR002293	Amino acid/polyamine transporter I	PFAM	PF13520	AA_permease_2	coord: 35..417 e-value: 2.4E-51 score: 174.8
IPR029485	Cationic amino acid transporter, C-terminal	PFAM	PF13906	AA_permease_C	coord: 600..649 e-value: 8.5E-19 score: 67.3
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 532..650

Blast

[Close]

BLAST of TCONS_00051946-protein vs. Swiss-Prot (Human)
Match: S7A14 (Probable cationic amino acid transporter OS=Homo sapiens GN=SLC7A14 PE=2 SV=3)

HSP 1 Score: 522.316 bits (1344), Expect = 7.414e-177
Identity = 303/651 (46.54%), Postives = 400/651 (61.44%), Query Frame = 0

Query:   31 LSKCLSTSQLIHLGIGATLGAGTYVVTGQVAANIAGPAVVISFTIAALTSILSGLCYAEFGSRVPQTTGSAYTYSYVTVGEIWAFFIGWNLILEYMIGTAADAAALSGSFDYAIGFHVRNWTLENIGAFNTPYLGD--YPDILSFVFTIIVTIVLAFGVRESARFTVMFNIFNIIVVIFIIVVGLFYIEPTNWTKGKGFFPYGASGVLSGAATCFYAFVGFDIIATTGEEATNPSKSIPIAIVASLVIIFTCYFGVSTVITMMIPYDELDKLSPIPAAFAQRGLGWAHYVISIGAICGLSSSLLGNLFPLPRIIYAMARDGLLFNMFTKIHEKTEVPVNATIYPGIMTAFFALLFDLEELVEMMSIGTLLAYTLVSLCVLILRYQPDEYYGDNSIMKPLVADDGSTIGSEDDDNEAQYGRTPSVTPRVSGDE-----------KNMLETSFNENFLQLPEQKQGGHTYSPTHNPD--------SAENEEEENEQKLKEFKQINDGTYTPMQNDQYPGRRE-PTLATGRAVTCACLCLFLWFFGFNSIILFAFDQLVRKEIWTITLLIIFGTLIIASVAVIYSMPQSSTKYGFMAPCVPALPILAIYANTFLMLKLSTITWVRFGVWMVIGILLYAFYGTFNSKVDKETNDE 659
            L++ L+T  LI LG+G+ +G G YVV+G VA  +AGP V++SF IAA+ SILSG+CYAEFG RVP+TTGSAYTYSYVTVGE  AFFIGWNLILEY+IGTAA A+ALS  FD      +  W  +++G  N    G+  YPD+L+ +  +IVTI++A GV+ S  F  + N+ N+ V +FI++ GLF+I    W +G+ F P+G SGVL GAATCFYAF+GFDIIATTGEEA NP+ SIP AI ASLVI  T Y  VS ++T+M+PY  +D  SP+   F   G   A +V++IG++ GL+ SLLG+LFP+PR+IYAMA DGLLF     +   TE PV A I  G + A  ALL  L +L+EMMSIGTLLAYTLVS+CVL+LRYQP+     +  +K L  +          D E +     + +P   GDE           KN+     NE  +     K    TY+  H P+          E +E EN   +K  K I    YT       PG+ + PT ATG  VT   L LF+  F F S I+F  D +  +  W I L+++   LI   V VI   P++  K  +MAPC+P +P  A+  N +LMLKLSTITW+RF VW  +G+L+Y  YG +NS ++    +E
Sbjct:   49 LAQVLTTVDLISLGVGSCVGTGMYVVSGLVAKEMAGPGVIVSFIIAAVASILSGVCYAEFGVRVPKTTGSAYTYSYVTVGEFVAFFIGWNLILEYLIGTAAGASALSSMFDSLANHTISRWMADSVGTLNGLGKGEESYPDLLALLIAVIVTIIVALGVKNSIGFNNVLNVLNLAVWVFIMIAGLFFINGKYWAEGQ-FLPHGWSGVLQGAATCFYAFIGFDIIATTGEEAKNPNTSIPYAITASLVICLTAYVSVSVILTLMVPYYTIDTESPLMEMFVAHGFYAAKFVVAIGSVAGLTVSLLGSLFPMPRVIYAMAGDGLLFRFLAHVSSYTETPVVACIVSGFLAALLALLVSLRDLIEMMSIGTLLAYTLVSVCVLLLRYQPES--DIDGFVKFLSEEHTKKKEGILADCEKE-----ACSPVSEGDEFSGPATNTCGAKNLPSLGDNEMLI----GKSDKSTYNVNH-PNYGTVDMTTGIEADESENIYLIKLKKLIGPHYYTMRIRLGLPGKMDRPTAATGHTVTICVLLLFILMFIFCSFIIFGSDYISEQSWWAILLVVLMVLLISTLVFVILQQPENPKKLPYMAPCLPFVPAFAMLVNIYLMLKLSTITWIRFAVWCFVGLLIYFGYGIWNSTLEISAREE 686

The following BLAST results are available for this feature:

BLAST of TCONS_00051946-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00051946-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S7A14	7.414e-177	46.54	Probable cationic amino acid transporter OS=Homo s...	[more]

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TCONS_00051946-protein (polypeptide) - C. hemisphaerica