TCONS_00051976-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051976-protein
Unique NameTCONS_00051976-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length250

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051976-protein ID=TCONS_00051976-protein|Name=TCONS_00051976-protein|organism=Clytia hemisphaerica|type=polypeptide|length=250bp
SIQIIKKRKSTSMPRRKTTRSIKRIKVEEDTSEEDTGLNDNDWRKQHRCK
RCTKVFINTSSLKVHMRTHNQEKSFVCEECGKTFTNSSNLKVHSHTHTGE
KPFKCDVCGKQFVNSSNLKCHRVKHSTSRAYKPHQCDYCTKRFVNTSNLK
VHLRVHTGEKPYNCNVCGKTFTTKGNLTYHVTQHHPDDDKENKQIKTHVC
SQCDKRFINSSNLKTHMRVHTGERPYKCSHCSKTFINTSNLKIHRMGYGH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032901XLOC_032901Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051976TCONS_00051976Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 47..69
e-value: 0.0054
score: 26.0
coord: 198..220
e-value: 1.7E-4
score: 31.0
coord: 162..184
e-value: 1.3E-4
score: 31.4
coord: 75..97
e-value: 0.0013
score: 28.0
coord: 103..125
e-value: 0.016
score: 24.4
coord: 134..156
e-value: 0.0018
score: 27.5
coord: 226..250
e-value: 0.066
score: 22.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 77..97
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 105..125
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 228..250
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 136..156
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 200..220
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 49..69
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 164..185
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 198..225
score: 16.456
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 75..102
score: 17.412
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 162..189
score: 11.905
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 47..74
score: 13.173
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 103..130
score: 12.674
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 226..250
score: 11.572
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 134..161
score: 15.937
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 196..245
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 132..184
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 45..85
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 73..125
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 198..220
e-value: 3.5E-6
score: 27.1
coord: 226..246
e-value: 1.8E-4
score: 21.7
coord: 75..97
e-value: 4.4E-6
score: 26.8
coord: 134..156
e-value: 7.5E-6
score: 26.0
coord: 47..69
e-value: 1.7E-5
score: 24.9
coord: 162..184
e-value: 5.9E-5
score: 23.2
coord: 103..125
e-value: 0.0061
score: 16.9
NoneNo IPR availableGENE3D2.20.28.10coord: 108..139
e-value: 1.2E-13
score: 50.1
coord: 167..202
e-value: 6.3E-14
score: 51.0
NoneNo IPR availableGENE3D3.30.160.60coord: 60..80
e-value: 7.6E-15
score: 54.6
NoneNo IPR availableGENE3D3.30.160.60coord: 24..59
e-value: 4.4E-8
score: 32.6
NoneNo IPR availableGENE3D3.30.160.60coord: 203..214
e-value: 1.0E-10
score: 41.2
NoneNo IPR availableGENE3D3.30.160.60coord: 81..93
e-value: 5.8E-14
score: 51.4
NoneNo IPR availableGENE3D3.30.160.60coord: 140..153
e-value: 1.9E-12
score: 46.5
NoneNo IPR availableGENE3D3.30.160.60coord: 215..247
e-value: 3.3E-17
score: 61.7
NoneNo IPR availableGENE3D2.20.25.10coord: 94..107
e-value: 2.7E-6
score: 26.8
coord: 154..166
e-value: 1.0E-6
score: 28.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20

Blast
BLAST of TCONS_00051976-protein vs. Swiss-Prot (Human)
Match: ZN177 (Zinc finger protein 177 OS=Homo sapiens GN=ZNF177 PE=1 SV=4)

HSP 1 Score: 183.341 bits (464), Expect = 6.180e-55
Identity = 95/199 (47.74%), Postives = 123/199 (61.81%), Query Frame = 0
Query:   47 HRCKRCTKVFINTSSLKVHMRTHNQEKSFVCEECGKTFTNSSNLKVHSHTHTGEKPFKCDVCGKQFVNSSNLKCHRVKHSTSRAYKPHQCDYCTKRFVNTSNLKVHLRVHTGEKPYNCNVCGKTFTTKGNLTYHVTQHHPDDDKENKQIKTHVCSQCDKRFINSSNLKTHMRVHTGERPYKCSHCSKTFINTSNLKIHR 245
            + C  C K FI  SSLK HMR+H  EK + C+ CGK+F+ SS+L VH  THTGEKP+ C  CGK F   S+L+ H   H+     KP++C  C K F++ S+LK H R HTGEKPY CN CGK+F+T   L  H   H  +        KT+ C +C K F NSS L+ H+R HTGE+PYKC  C K F  ++NL +H+
Sbjct:  284 YECSDCGKAFIFQSSLKKHMRSHTGEKPYECDHCGKSFSQSSHLNVHKRTHTGEKPYDCKECGKAFTVPSSLQKHVRTHT---GEKPYECSDCGKAFIDQSSLKKHTRSHTGEKPYECNQCGKSFSTGSYLIVHKRTHTGE--------KTYECKECGKAFRNSSCLRVHVRTHTGEKPYKCIQCEKAFSTSTNLIMHK 471          

HSP 2 Score: 152.525 bits (384), Expect = 2.426e-43
Identity = 82/186 (44.09%), Postives = 111/186 (59.68%), Query Frame = 0
Query:   60 SSLKVHMRTHNQEKSFVCEECGKTFTNSSNLKVHSHTHTGEKPFKCDVCGKQFVNSSNLKCHRVKHSTSRAYKPHQCDYCTKRFVNTSNLKVHLRVHTGEKPYNCNVCGKTFTTKGNLTYHVTQHHPDDDKENKQIKTHVCSQCDKRFINSSNLKTHMRVHTGERPYKCSHCSKTFINTSNLKIHR 245
            S L VH +T + E+   C E  KTFT+  +L+    TH+GE P++C  CGK F+  S+LK H   H+     KP++CD+C K F  +S+L VH R HTGEKPY+C  CGK FT   +L  HV  H  +        K + CS C K FI+ S+LK H R HTGE+PY+C+ C K+F   S L +H+
Sbjct:  241 SPLSVHTKTGSVEEGLECNEHEKTFTDPLSLQNCVRTHSGEMPYECSDCGKAFIFQSSLKKHMRSHT---GEKPYECDHCGKSFSQSSHLNVHKRTHTGEKPYDCKECGKAFTVPSSLQKHVRTHTGE--------KPYECSDCGKAFIDQSSLKKHTRSHTGEKPYECNQCGKSFSTGSYLIVHK 415          

HSP 3 Score: 144.436 bits (363), Expect = 2.679e-40
Identity = 80/181 (44.20%), Postives = 102/181 (56.35%), Query Frame = 0
Query:   44 RKQHRCKRCTKVFINTSSLKVHMRTHNQEKSFVCEECGKTFTNSSNLKVHSHTHTGEKPFKCDVCGKQFVNSSNLKCHRVKHSTSRAYKPHQCDYCTKRFVNTSNLKVHLRVHTGEKPYNCNVCGKTFTTKGNLTYHVTQHHPDDDKENKQIKTHVCSQCDKRFINSSNLKTHMRVHTGER 224
             K + C  C K F  +S L VH RTH  EK + C+ECGK FT  S+L+ H  THTGEKP++C  CGK F++ S+LK H   H+     KP++C+ C K F   S L VH R HTGEK Y C  CGK F     L  HV  H  +        K + C QC+K F  S+NL  H R+H G++
Sbjct:  309 EKPYECDHCGKSFSQSSHLNVHKRTHTGEKPYDCKECGKAFTVPSSLQKHVRTHTGEKPYECSDCGKAFIDQSSLKKHTRSHT---GEKPYECNQCGKSFSTGSYLIVHKRTHTGEKTYECKECGKAFRNSSCLRVHVRTHTGE--------KPYKCIQCEKAFSTSTNLIMHKRIHNGQK 478          

HSP 4 Score: 104.375 bits (259), Expect = 9.716e-26
Identity = 77/245 (31.43%), Postives = 110/245 (44.90%), Query Frame = 0
Query:   53 TKVFINTSSLKVHMRTHNQEKSFVCEECGKTFTNSSNLKVHSHTHTG----------------------------------------------------EKPFKCDVCGKQFVNSSNLK-CHRVKHSTSRAYKPHQCDYCTKRFVNTSNLKVHLRVHTGEKPYNCNVCGKTFTTKGNLTYHVTQHHPDDDKENKQIKTHVCSQCDKRFINSSNLKTHMRVHTGERPYKCSHCSKTFINTSNLKIH 244
            +KVF + S+L+ H+  H  EK+    +C K F   S+L+ H  T TG                                                    E+  +C+   K F +  +L+ C R  HS    Y   +C  C K F+  S+LK H+R HTGEKPY C+ CGK+F+   +L  H   H  +        K + C +C K F   S+L+ H+R HTGE+PY+CS C K FI+ S+LK H
Sbjct:  154 SKVFNHPSTLRSHVSIHIGEKTLEFTDCRKAFNQESSLRKHLRTPTGQKFQEYEQCDMSFSLHSSCSVREQIPTGEKGDECSDYGKISPLSVHTKTGSVEEGLECNEHEKTFTDPLSLQNCVRT-HSGEMPY---ECSDCGKAFIFQSSLKKHMRSHTGEKPYECDHCGKSFSQSSHLNVHKRTHTGE--------KPYDCKECGKAFTVPSSLQKHVRTHTGEKPYECSDCGKAFIDQSSLKKH 386          

HSP 5 Score: 83.5741 bits (205), Expect = 2.130e-18
Identity = 43/89 (48.31%), Postives = 56/89 (62.92%), Query Frame = 0
Query:   44 RKQHRCKRCTKVFINTSSLKVHMRTHNQEKSFVCEECGKTFTNSSNLKVHSHTHTGEKPFKCDVCGKQFVNSSNLKCHRVKHSTSRAYK 132
             K + C +C K F   S L VH RTH  EK++ C+ECGK F NSS L+VH  THTGEKP+KC  C K F  S+NL  H+  H+  + ++
Sbjct:  393 EKPYECNQCGKSFSTGSYLIVHKRTHTGEKTYECKECGKAFRNSSCLRVHVRTHTGEKPYKCIQCEKAFSTSTNLIMHKRIHNGQKLHE 481          

HSP 6 Score: 82.8037 bits (203), Expect = 4.395e-18
Identity = 61/185 (32.97%), Postives = 84/185 (45.41%), Query Frame = 0
Query:   82 KTFTNSSNLKVHSHTHTGEKPFKCDVCGKQFVNSSNLKCHRVKHSTSRAYKPHQCDY-------CTKR--------------FVNTSNLKVHLRVHTGEKPYNCNVCGKTFTTKGNLTYHVTQHHPDDDKENKQIKTHVCSQCDKRFINSSNLKTHMRVHTGERPYKCSHCSKTFINTSNLKIHR 245
            K F + S L+ H   H GEK  +   C K F   S+L+ H    +  +  +  QCD        C+ R              +   S L VH +  + E+   CN   KTFT   +L   V  H  +   E        CS C K FI  S+LK HMR HTGE+PY+C HC K+F  +S+L +H+
Sbjct:  155 KVFNHPSTLRSHVSIHIGEKTLEFTDCRKAFNQESSLRKHLRTPTGQKFQEYEQCDMSFSLHSSCSVREQIPTGEKGDECSDYGKISPLSVHTKTGSVEEGLECNEHEKTFTDPLSLQNCVRTHSGEMPYE--------CSDCGKAFIFQSSLKKHMRSHTGEKPYECDHCGKSFSQSSHLNVHK 331          
The following BLAST results are available for this feature:
BLAST of TCONS_00051976-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN1776.180e-5547.74Zinc finger protein 177 OS=Homo sapiens GN=ZNF177 ... [more]
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