TCONS_00051981-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00051981-protein
Unique NameTCONS_00051981-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length513

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00051981-protein ID=TCONS_00051981-protein|Name=TCONS_00051981-protein|organism=Clytia hemisphaerica|type=polypeptide|length=513bp
QPQYINSKMAERKSMLQKGGYREPLSPISLSQAASRTPMRKKTSNMTAKT
PTAKTPLAKTPGKKGTSISNSSTSDYDRFIPNRALMNNKLGHHMLMKLKK
NEETEDDTDKEDFSELMRQNLNGEIEKTGARILQMKIKAPQTKEGEVATK
MLYTKSKPTPAKFKSTRHIPSVADKILDAPEIVDDYYLNLLDWGQNGLIA
VPLYNAIYLWNSESGTVEELFGESPITDDNIMVTSVKWITEGMHIAVGMS
NGNIELWDAAVNKRVRSMGGHPTRVGSLDWNQHILTSGARSGSIFNHDVR
VASHHVSSFLHHTQEICGLQWSPNGKLLASGGNDNVLNVWDMASTSNGNA
TTNDAGVNEVRTPLHSLCEHMAAVKAVSWCPWQRNVLASGGGTVDRHIRI
WNAQTGTCLNSLDTMNQISGILWSDTYKEIICSHANQMTIWKYPSMTRET
ELTGHTGRILNITSSPNGVFVASAGADETLRLWKCFEADQKKTRPAKKDD
SSRGPISSNNNVR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032906XLOC_032906Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00051981TCONS_00051981Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR024977Apc4_WD40_dom
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 445..484
e-value: 1.2E-5
score: 34.8
coord: 261..298
e-value: 13.0
score: 10.0
coord: 217..258
e-value: 12.0
score: 10.2
coord: 360..402
e-value: 0.012
score: 24.8
coord: 405..442
e-value: 56.0
score: 6.0
coord: 302..341
e-value: 3.6E-8
score: 43.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 307..341
e-value: 6.1E-6
score: 26.8
coord: 362..402
e-value: 7.6E-4
score: 20.1
coord: 451..484
e-value: 1.6E-4
score: 22.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 226..267
score: 9.372
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 309..350
score: 14.719
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 452..484
score: 13.249
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 161..490
e-value: 2.0E-63
score: 213.8
IPR024977Anaphase-promoting complex subunit 4, WD40 domainPFAMPF12894ANAPC4_WD40coord: 228..282
e-value: 9.7E-5
score: 22.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 491..513
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 389..403
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 328..342
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 226..493
score: 28.607
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 189..484

Blast
[Close]
BLAST of TCONS_00051981-protein vs. Swiss-Prot (Human)
Match: CDC20 (Cell division cycle protein 20 homolog OS=Homo sapiens GN=CDC20 PE=1 SV=2)

HSP 1 Score: 413.69 bits (1062), Expect = 2.276e-140
Identity = 211/473 (44.61%), Postives = 302/473 (63.85%), Query Frame = 0 
Query:   37 TPMRKKTSNMTAKTPTAKTPLAKTPGKKGTSISNS-STSDYDRFIPNRALMNNKLGHHMLMKLKKNEETEDDTDKEDFSELMRQNLNG-EIEKTGARILQMKIKAPQTKEG-EVATKMLYTKSKPTPAKFKSTRHIPSVADKILDAPEIVDDYYLNLLDWGQNGLIAVPLYNAIYLWNSESGTVEELFGESPITDDNIMVTSVKWITEGMHIAVGMSNGNIELWDAAVNKRVRSMGGHPTRVGSLDWNQHILTSGARSGSIFNHDVRVASHHVSSFLHHTQEICGLQWSPNGKLLASGGNDNVLNVWDMASTSNGNATTNDAGVNEVRTPLHSLCEHMAAVKAVSWCPWQRNVLASGGGTVDRHIRIWNAQTGTCLNSLDTMNQISGILWSDTYKEIICSHA---NQMTIWKYPSMTRETELTGHTGRILNITSSPNGVFVASAGADETLRLWKCFEADQKKTRPAKKDDSSR 503
            +PMR    + +A     +TP  +TPGK  + +  + S    DR+IP+R+    ++   +L K  + E ++  T KE   +    NLNG ++E+  A+IL++  K     EG +   K+LY++     +  K+ R+IPS+ D+ILDAPEI +DYYLNL+DW    ++AV L N++YLW++ SG + +L     +      ++SV WI EG ++AVG S+  ++LWD    KR+R+M  H  RVGSL WN +IL+SG+RSG I +HDVRVA HHV++   H+QE+CGL+W+P+G+ LASGGNDN++NVW  A    G              PL +  +H  AVKAV+WCPWQ NVLA+GGGT DRHIRIWN  +G CL+++D  +Q+  ILWS  YKE+I  H    NQ+ IWKYP+M +  EL GHT R+L++T SP+G  VASA ADETLRLW+CFE D  + R  +K  +++
Sbjct:   41 SPMRAANRSHSA----GRTP-GRTPGKSSSKVQTTPSKPGGDRYIPHRSAAQMEVASFLLSKENQPENSQTPTKKE-HQKAWALNLNGFDVEE--AKILRLSGKPQNAPEGYQNRLKVLYSQKATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG------------WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAAK 490
The following BLAST results are available for this feature:
BLAST of TCONS_00051981-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CDC202.276e-14044.61Cell division cycle protein 20 homolog OS=Homo sap... [more]
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