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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00052045-protein ID=TCONS_00052045-protein|Name=TCONS_00052045-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1259bp
MARTKQTARKSTGGKCPRKKLARRKDIKLWKNNGNTVNDGATNSKTEEVD
QEDGENTYPVEELTNLLAEIKDEPGSFATDGILKQSPLPGLNIEGVGPVC
LPLCADSAKRIIEVARQAPFGLGEKTVVDENIRKSWEIDPKRITLKNPRF
QSALKALVFKVQQELGCGNNNIRADLYKLLLYEVGGHFKPHKDSEKQDGM
FATLIVQLPSIFSGNQLIVRHGGKTHTVDFGCDDAEFSILYAAHYADCEH
EVTPLTEGHRLALIYNLVWTAPSEPPNLDQNAKMVQKLSTLLKKVEREHD
NVYGWSLEHQYSTSSLANGMAALKGKDRQIARSLSAASEEMNPNEQTSFY
LMKLERHLNESGDHCGGGYYGRSDYSDGEFEACEIMDDETEIKEVYDFEG
EEHDLKHVCFDIEEDLLDFEEKYDGDIESFWGEHDSEEVEGPTGNEGSSR
DRWYSSYIILAIPESQKFKLLCQSGIKESLQHLSGEFESSSPKFKDHFRT
FLTKFKASAYKDEKSYSRQPQNIVNKQPPGRKSMTKVMSMLEKTRDPDLT
NLFVKNVLNGSKSSYAYRGDGEIFSIYYENIEKPVADLLKSVSWESIKEE
VESVIVASPINHYLRWAKAYNHNGITEIAHKIIEQCLQKVEKLTGEEFYP
LWGEIFSLIFNNELFGTRWWDSIMTCTQIISNLPLLSHLCSRLSPENQTK
FPRLFDGLIDLMKQPTTSHSNDTLASNLFSAIKQIIEDLFYIRKLQELCD
ALVANNKLPVIGLFLGLLLKDKQSCTDSEAFKLFLSAYMSWMDNTTLHES
NLKEIVNIANVVYQSNTPSNETSAKFIASCKKIANPDLLCMTLNELFAVF
KEKNVPDHSIVLKSLLDSLLNLITLQPLRNAKSMSALILLIFEKGRTFED
ILCKFIATKYVSNSMETLGNVLAALCTSDNKETLRPNNNFQAILGLYTLL
LQNGVKPDLKSYSATLTFLFNDESWSLSLPLLPTLLEIDFIKKDFKNCAF
SISQVPSGIITDNFKKLLKTGVDSLELFLVQNKTVSDPDYKVILGFVQVL
FDDLTNFGDIVLRFISIAQLKINDYSNMSAPSSVLKRLINDLRPKYVATE
MYAKLLLVRVSNLQLIQSFGQPKLSWVQPNAILTGHPTVQQFLRSPREDF
AYRNFNGIAHARNWASKHQGYHPQKGYSFRASTHGTGRNATAQLKKGREF
YSLKLKAYQTLMTELEQLQTKLKAFPNVYSEIGDKRPATTPLSNISNIPP
SKKVVIEID Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000164 | Histone_H3/CENP-A |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000786 | nucleosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0000786 |
nucleosome |
| molecular_function |
GO:0003677 |
DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 278..298 |
| None | No IPR available | GENE3D | 2.60.120.620 | | coord: 103..271
e-value: 1.4E-12
score: 47.3 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 27..56 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..20 |
| IPR000164 | Histone H3/CENP-A | PRINTS | PR00622 | HISTONEH3 | coord: 3..17
score: 90.87
coord: 17..31
score: 39.13 |
Blast
The following BLAST results are available for this feature:
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