TCONS_00052070-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052070-protein
Unique NameTCONS_00052070-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length478

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052070-protein ID=TCONS_00052070-protein|Name=TCONS_00052070-protein|organism=Clytia hemisphaerica|type=polypeptide|length=478bp
MSRKVKPRQRFHSLSTSLPDVDGNKGFELPFNCLSSFDPTDEFDENGESK
DMAEILEKVAKENESRSPSPPAYTGPLDRFRRLVKAIIVQNRWTSFQNKV
ADEYQMNRLHLQEDPDNADILTFNPGAFRCNTNAEQILSKEAKLLLCHAP
WKRSEKDIKFIYKALDGLTLFKKFSPIIKRELAKSLNFECFEDGRIIIQQ
GHPGISLYFVVKGSVAVQVATTDKANGNVYKQIVNEIMAGGSFGEMALMS
GMNRAATVICIGTSEFLRIDKGDFREVLMRSFQKEWERKTLFMKDCILFK
EWTFKEIRGAGAASSIKEYQNNKVIVKDLSTHKGTVYVVMFGTCLVVSKI
NVIKESLPYGKEYIRMITPEQVKTAPITRYQRKESIFLVIRRLKQGDCFG
IGEQLPQTSVISQHKVEVLAVPTIHILRHGRDQSLEKIQAIEIKKYPTLR
NAFKNFQTHREWKMYKKDLKDSIIGRKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032978XLOC_032978Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052070TCONS_00052070Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000595cNMP-bd_dom
IPR014710RmlC-like_jellyroll
IPR018488cNMP-bd_CS
IPR018490cNMP-bd-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000595Cyclic nucleotide-binding domainSMARTSM00100cnmp_10coord: 170..293
e-value: 8.2E-10
score: 48.6
IPR000595Cyclic nucleotide-binding domainPFAMPF00027cNMP_bindingcoord: 191..280
e-value: 8.9E-18
score: 64.0
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 170..295
score: 25.735
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 97..282
e-value: 5.4E-31
score: 106.9
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 283..460
e-value: 1.3E-7
score: 30.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableCDDcd00038CAP_EDcoord: 170..283
e-value: 1.4724E-25
score: 99.7077
IPR018488Cyclic nucleotide-binding, conserved sitePROSITEPS00889CNMP_BINDING_2coord: 243..260
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 286..423
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 140..280

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052070-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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