TCONS_00052080-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052080-protein
Unique NameTCONS_00052080-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length740

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052080-protein ID=TCONS_00052080-protein|Name=TCONS_00052080-protein|organism=Clytia hemisphaerica|type=polypeptide|length=740bp
MIRQKDRRKSSLSSSKDPSTYPLYQQKYPIRLPKLVAQEDQKNRKSSSGT
RKLEEKKMVATTTSDGLFAKREITENDKEKILKELECLQLEEYLEEEAII
EPFDLPMPPSSTTIRSLKEKSRKNSLSPKNRRKSSISSDNNKGTTNETLD
IDPRKRLKKRRSSVSKQQRTAADDEKDEVQLALTLSKRATIVKTRTGRLQ
ETRKKSAERPNSMKFRPRSPFNAKSKLTTGPIREVSKEFIKTLRQERESM
QIHRVKKSVVKEALAVRRPTSRSPPLPPPHPDTIDLPSPGEQFADCSSKL
MKCVKFINNVSNGSKSPTSDSEDKRKMYNYSPMRRNSTGKSLWQNFKLGQ
DRLMSSLSNYNARMSPFRDEDDNLHGKPITYAVAKNLRLLLFGTLSHSFN
MLWREQTIQFIKPEHYGLRYYLDGPTELMVVIQAHVLKYLLFLNTENVVS
DLAERLSPNEWSQDKALALAICDILWKCGQKKTAVVALPLGSCKFIAESK
YKEDKITEKMEIFKFTNSDVAEKFIRRNLKLFKEAGGCISFLYSMLLSRG
LSRVYEDFCELGRGLLQSNDECLNYRCQALINLGIYGEAVPNIFNGESEH
YDIMENRHILEKGLKRRSEMGYLTHEEFTDKKNYMVGSCLKTPFYPIWIL
KNNNKLCVLFSLKKELLSDWKLERRFDLYHYQGISRHVGSVSLDVRLTID
TVLPCNLPNEEEEEENSSLEETIRTKWEDSFIDWNGAIRF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032985XLOC_032985Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052080TCONS_00052080Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025257DUF4205
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..226
IPR025257Domain of unknown function DUF4205SMARTSM01174DUF4205_3coord: 388..736
e-value: 3.8E-71
score: 252.3
IPR025257Domain of unknown function DUF4205PFAMPF13898DUF4205coord: 388..736
e-value: 1.0E-88
score: 297.5

Blast
[Close]
BLAST of TCONS_00052080-protein vs. Swiss-Prot (Human)
Match: MINY4 (Probable ubiquitin carboxyl-terminal hydrolase MINDY-4 OS=Homo sapiens GN=MINDY4 PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 4.702e-54
Identity = 123/365 (33.70%), Postives = 194/365 (53.15%), Query Frame = 0 
Query:  377 KPITYAVAKNLRLLLFGTLSHSFNMLWREQTIQFIKPEH--YGLRYYLDGPTELMVVIQAHVLKYLLFLNTENVVSDLAERLSPNEWSQDKALALAICDILWKCGQKKTAVVALPLGSCKFIAESKYKEDKITEKMEIFKFTNSDVAEKFIRRNLKLFKEAG--GCISFLYSMLLSRGLSRVYEDFCELGRGLLQSNDECLNYRCQALINLGIYGEAVPNIFNGESEHYDIMENRHILEKGLKRRSEMGYLTHEEFTDKKNYMVGSCLKTPFYPIWILKNNNKLCVLFSLKKELLSDWKLERRFDLYHYQGISRHVGSVSLDVRLTIDTVLPCNLPNEEEEEENSSLEETIRTKWEDSFIDWNGA 737
            KPI  +VAK ++ LLFG+    FN  W+ Q+  F       YG+     GP  ++  +Q  VL+ LLF       +D A+ L P++  + + L LA+ DI+W+ G ++ AVVAL   + +F    KYK D + E + +   T  +    F+++++  F E G  GCI    S +LSR    + +DF      L+ ++  C     Q L+NL + G+AV N+FN   E  D  +    L +G+  RS++G+L+   F       VG  LKTP +PIW++ + +   +LFSL+  LL DW+ ER FDLY+Y G++         +RLTIDT     +  + + +    LE  IRTKW+ + ++WNG+
Sbjct:  405 KPIDLSVAKEIKTLLFGSSFCCFNEEWKLQSFSFSNTASLKYGIVQNKGGPCGVLAAVQGCVLQKLLFEGDSK--ADCAQGLQPSDAHRTRCLVLALADIVWRAGGRERAVVALASRTQQFSPTGKYKADGVLETLTLHSLTCYEDLVTFLQQSIHQF-EVGPYGCILLTLSAILSRSTELIRQDFDVPTSHLIGAHGYC----TQELVNLLLTGKAVSNVFNDVVE-LDSGDGNITLLRGIAARSDIGFLSL--FEHYNMCQVGCFLKTPRFPIWVVCSESHFSILFSLQPGLLRDWRTERLFDLYYYDGLANQ----QEQIRLTIDTTQ--TISEDTDNDLVPPLELCIRTKWKGASVNWNGS 753
The following BLAST results are available for this feature:
BLAST of TCONS_00052080-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MINY44.702e-5433.70Probable ubiquitin carboxyl-terminal hydrolase MIN... [more]
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