TCONS_00052081-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052081-protein
Unique NameTCONS_00052081-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length262

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052081-protein ID=TCONS_00052081-protein|Name=TCONS_00052081-protein|organism=Clytia hemisphaerica|type=polypeptide|length=262bp
MVRIVLLVVFLVIASDIQGRVQEKRIIHGTEAKPGAWPWVVLLQIKSQGK
TSNCGGTILSKTWIMTAAHCFKSKPAASDILVVAGAQNIKVHEESQQRIT
AKRYVVNPGYNPPAKEADIALIELSTPLKFNKRVEQARIQAKDEYPSLEK
TCFIAGWGRTSVDPIVRPDTLQEAQLPILPERLAFEEFIYAGFKDGDTKP
NACYGDSGGPLMCKTTFLRRWVVQGPISHSSVGDCMYDTAVIPVAKYLSW
VKQFVKDLKTQN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_032986XLOC_032986Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052081TCONS_00052081Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR033116TRYPSIN_SER
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 55..70
score: 50.74
coord: 114..128
score: 36.13
coord: 200..212
score: 59.83
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 25..251
e-value: 4.6E-53
score: 192.3
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 26..251
e-value: 1.2E-50
score: 172.3
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 26..256
score: 26.877
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 26..253
e-value: 1.44607E-63
score: 200.195
NoneNo IPR availableGENE3D2.40.10.10coord: 25..36
e-value: 0.0017
score: 17.6
NoneNo IPR availableGENE3D2.40.10.10coord: 64..262
e-value: 4.5E-48
score: 163.2
NoneNo IPR availableGENE3D2.40.10.10coord: 37..63
e-value: 3.0E-17
score: 62.0
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 201..212
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 65..70
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 6..256

Blast
[Close]
BLAST of TCONS_00052081-protein vs. Swiss-Prot (Human)
Match: CEL2A (Chymotrypsin-like elastase family member 2A OS=Homo sapiens GN=CELA2A PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.241e-33
Identity = 79/273 (28.94%), Postives = 128/273 (46.89%), Query Frame = 0 
Query:    1 MVRIVLLVVFLVIA---SDIQGRVQEKRIIHGTEAKPGAWPWVVLLQIKSQGK-TSNCGGTILSKTWIMTAAHCFKSKPAASDILVVAGAQNIKVHEESQQRITAKRYVVNPGYNPP--AKEADIALIELSTPLKFNKRVEQARIQAKDEYPSLEKTCFIAGWGRTSVDPIVRPDTLQEAQLPILPERLAFEEFIYAG-------FKDGDTKPNACYGDSGGPLMCKTTFLRRWVVQGPISHSSVGDCMY---DTAVIPVAKYLSWVKQFVKD 257
            M+R +LL   +  A    D        R++ G EA+P +WPW V LQ  S GK    CGG++++ +W++TAAHC  S   +    V  G  N+ V E     ++  + VV+  +N    +K  DIAL++L+ P+    +++ A +            C++ GWGR   +  V PD LQ+ +L ++          +            GD   ++C GDSGGPL C+ +   RW V G +S  S   C Y    +    V+ Y+ W+   + +
Sbjct:    1 MIRTLLLSTLVAGALSCGDPTYPPYVTRVVGGEEARPNSWPWQVSLQYSSNGKWYHTCGGSLIANSWVLTAAHCISS---SRTYRVGLGRHNLYVAESGSLAVSVSKIVVHKDWNSNQISKGNDIALLKLANPVSLTDKIQLACLPPAGTILPNNYPCYVTGWGRLQTNGAV-PDVLQQGRLLVVDYATCSSSAWWGSSVKTSMICAGGDGVISSCNGDSGGPLNCQASD-GRWQVHGIVSFGSRLGCNYYHKPSVFTRVSNYIDWINSVIAN 268
The following BLAST results are available for this feature:
BLAST of TCONS_00052081-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CEL2A1.241e-3328.94Chymotrypsin-like elastase family member 2A OS=Hom... [more]
back to top