TCONS_00052115-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052115-protein
Unique NameTCONS_00052115-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length294

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052115-protein ID=TCONS_00052115-protein|Name=TCONS_00052115-protein|organism=Clytia hemisphaerica|type=polypeptide|length=294bp
MLLITLILTNIVLVQSQWYLGEEKQQNTTNLDTKDASKPVLVTSPVECIL
KCKRKGMDNFYVKDKNECFCLKSQDQAINSDGESMQGIVYKQYCNEETYG
DSNPLVIKDKKKLKIRKATSTTPVLQWADLHIYRLDVKAGEHRLGDIFIF
TELDNTMSGNYVVSPVNPSDNDIFKVPISYEKFWMLGDSAFWRPTCPAGY
ARFGILGTVQGKRPVDGDIYCVKEEYTLEGSIEWELLWKWDRDASNRAKI
FKGKSGQPEKTVDLITVLVALKNIHQSPSQKYHFLLKEFIVEEN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033005XLOC_033005Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052115TCONS_00052115Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd
IPR009291Vps62
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 32..103
e-value: 1.6E-4
score: 21.7
IPR009291Vacuolar protein sorting-associated protein 62PFAMPF06101Vps62coord: 175..246
e-value: 4.9E-6
score: 25.0

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052115-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top