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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00052160-protein ID=TCONS_00052160-protein|Name=TCONS_00052160-protein|organism=Clytia hemisphaerica|type=polypeptide|length=603bp
MSTSDDFELPGGENYDKQWQALAGWFLGPRAENRNVFNGLMMKALNWHEN
RREEFFPADPSYFTSEFRNSSAAQAEYKDLETKMAEMHTQLNKSIPFFST
RYQGHMTWDTTMPSLLGYVSGLLWNQNNVDSTASPVTTQFEVEVGQQLCA
LMRFDTVKNTPWGHLTGCGSVANLESMWAARNTKLHPLALKNAICDHTTD
YPRLAIGMDYPVDVPAFGKGNTPLASCTNWELLNLRIDFICEMTDKVVEY
IVANTSDKGGMTKDEFKAAVKSDVDTTLALESCVQIGLPEFYRKHNIGEP
SEVAPNPRRYPRVYSAGTNHYSWPKSATVLGIGDSQVIPITINSRARQNM
DYLKEQLDYAVTHQIPVFMVVAVIGSTEESSVDDLDQILKFKNDYEVLGL
TFSVHADSAWGGYLNTMTHDAKDTNVIPNQIGVHDFVPTIPLSDYVRLQY
LKLALADTITIDPHKAGFCPYPAGALLYRNGTMKGFITLAAPEVFHSPDD
LNVGIYGLEGSKPGAAACGVLLSHRVIGLDSNGYGRILGQCQFGSKLFYC
MWETIARAKDPFICQNLIAPILSELNATEAFQPPNEFTSIAQVHEYIADH
ILX Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016831 | carboxy-lyase activity |
| GO:0030170 | pyridoxal phosphate binding |
| GO:0003824 | catalytic activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019752 | carboxylic acid metabolic process |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0019752 |
carboxylic acid metabolic process |
| molecular_function |
GO:0016831 |
carboxy-lyase activity |
| molecular_function |
GO:0003824 |
catalytic activity |
| molecular_function |
GO:0030170 |
pyridoxal phosphate binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 70..90 |
| IPR002129 | Pyridoxal phosphate-dependent decarboxylase | PFAM | PF00282 | Pyridoxal_deC | coord: 313..412
e-value: 1.2E-6
score: 27.4 |
| IPR015421 | Pyridoxal phosphate-dependent transferase, major region, subdomain 1 | GENE3D | 3.40.640.10 | | coord: 126..514
e-value: 4.3E-32
score: 110.5 |
| IPR015424 | Pyridoxal phosphate-dependent transferase | SUPERFAMILY | 53383 | PLP-dependent transferases | coord: 73..184
coord: 292..415
coord: 442..548 |
Blast
The following BLAST results are available for this feature:
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