TCONS_00052189-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052189-protein
Unique NameTCONS_00052189-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length368

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052189-protein ID=TCONS_00052189-protein|Name=TCONS_00052189-protein|organism=Clytia hemisphaerica|type=polypeptide|length=368bp
MSCQNPFDTSIILIPQDEDGICFCGYIIIANKDEFRVNIHLKEKGSLKDA
RLDCSWDVLQTLKGYEEAIQKKLNQSSSIHEFLTELKALVENITSFSSLN
DRPDDIGSHQLTEIFQEIEQIGWDKLVFTDNNFGTLKFVHCDKESREHIL
VLERQGAFSDFVASTNLPVNLQQKKNEKILVKYNKFVKIVDKCQLFWNVL
KDLDEECWILEPEVPSYDCQYRRIALGKNASLRIDVNPLQPSTFPECRFL
GPSTVIDPLKQNLNKHMHLWDDQKDLLDNLRTVLDIEFPSKTTVEINELR
VECGICYAYQLEDEIPDKSCEDTRCAQTFHSSCLLEWMRCLPSFRQSFNV
VFGQCPYCEKKLTIKLKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033044XLOC_033044Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052189TCONS_00052189Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019162FancL_WD-rpt_cont_dom
IPR013083Znf_RING/FYVE/PHD
IPR026850FANCL_C
IPR001841Znf_RING
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM01197FANCL_C_2coord: 299..367
e-value: 5.8E-37
score: 138.8
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 273..365
IPR019162Fanconi anemia complex, subunit FancL, WD-repeat containing domainPFAMPF09765WD-3coord: 12..290
e-value: 3.2E-72
score: 243.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 296..364
e-value: 5.4E-6
score: 25.4
IPR026850FANCL C-terminal domainPFAMPF11793FANCL_Ccoord: 301..365
e-value: 5.9E-29
score: 100.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 303..359
score: 8.506

Blast
[Close]
BLAST of TCONS_00052189-protein vs. Swiss-Prot (Human)
Match: FANCL (E3 ubiquitin-protein ligase FANCL OS=Homo sapiens GN=FANCL PE=1 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 3.224e-95
Identity = 137/363 (37.74%), Postives = 215/363 (59.23%), Query Frame = 0 
Query:   12 ILIPQDEDGICFCGYIIIANKDEFRVNIHLKEKGSLKDARLDCSWDVLQTLKGYEEAIQKKLNQSSSIHEFLTELKALVE----NITSFSSLNDRPDDIGSHQLTEIFQEIEQIGWDKLVFTDNNFGTLKFVHCDKESREHILVLERQGAFS----DFVASTNLPVNLQQKKNEKILVKYNKFVKIVDKCQLFWNVLKDLDEECWILEPEVPSYDCQYRRIALGKNASLRIDVNPLQPSTFPECRFLGPSTVIDPLKQNLNKHMHLWDDQKDLLDNLRTVLDIEFPSKTTVEINELRVECGICYAYQLEDEIPDKSCEDTRCAQTFHSSCLLEWMRCLPSFRQSFNVVFGQCPYCEKKLTIKL 366
            +L+PQ+     + G+I    +D F + I L E   LK+ARL CSW +   L GY   +Q+++  S  +  F+ ELK L+E    N     +L   P    S     + +EI  +GWDKLV+ D  F T+K    D   REH++ L+ +  +     D+     +P          ++  Y++F+  ++  + FW+V+ ++DE+ W+LEPE P      RRIALG N S+ I+V+P  P+  PEC FLG   V+ PL   L++++HLWD +  +L NL+ VL+I+FP++  +E ++  ++CGICYAYQL+  IPD+ C++++C Q FH  CL EW+R L + RQSFN++FG+CPYC K +T+K+
Sbjct:   14 LLLPQNRSKTVYEGFISAQGRD-FHLRIVLPEDLQLKNARLLCSWQLRTILSGYHRIVQQRMQHSPDLMSFMMELKMLLEVALKNRQELYALPPPPQFYSS-----LIEEIGTLGWDKLVYADTCFSTIKLKAEDASGREHLITLKLKAKYPAESPDYFVDFPVPFCASWTPQSSLISIYSQFLAAIESLKAFWDVMDEIDEKTWVLEPEKPPRSATARRIALGNNVSINIEVDPRHPTMLPECFFLGADHVVKPLGIKLSRNIHLWDPENSVLQNLKDVLEIDFPARAILEKSDFTMDCGICYAYQLDGTIPDQVCDNSQCGQPFHQICLYEWLRGLLTSRQSFNIIFGECPYCSKPITLKM 370
The following BLAST results are available for this feature:
BLAST of TCONS_00052189-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FANCL3.224e-9537.74E3 ubiquitin-protein ligase FANCL OS=Homo sapiens ... [more]
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