TCONS_00052201-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052201-protein
Unique NameTCONS_00052201-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length149

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052201-protein ID=TCONS_00052201-protein|Name=TCONS_00052201-protein|organism=Clytia hemisphaerica|type=polypeptide|length=149bp
LDIPRAPGLGLLLERVEYQQYNEKYGNDGLHNPLTWQDLELEVERFKIEC
IWQSIMEEEIKKSPMVIWLKTLANHTYSTVGMNQPQDTGYKGQKGVFPTN
VPNSNNKRGRGTYRGHKRPWESGPRGGGRGGRGGRGGWNNNNNRGGANK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033053XLOC_033053Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052201TCONS_00052201Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
LDIPRAPGLGLLLERVEYQQYNEKYGNDGLHNPLTWQDLELEVERFKIECIWQSIMEEEIKKSPMVIWLKTLANHTYSTVGMNQPQDTGYKGQKGVFPTNVPNSNNKRGRGTYRGHKRPWESGPRGGGRGGRGGRGGWNNNNNRGGANK20406080100120140Score = Sequencemobidb-lite
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..149

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052201-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
LDIPRAPGLGLLLERVEYQQYNEKYGNDGLHNPLTWQDLELEVERFKIECIWQSIMEEEIKKSPMVIWLKTLANHTYSTVGMNQPQDTGYKGQKGVFPTNVPNSNNKRGRGTYRGHKRPWESGPRGGGRGGRGGRGGWNNNNNRGGANK20406080100120140Expect = 9.47e-21 / Id = 45.78SequenceTRUA
Match NameE-valueIdentityDescription
TRUA9.474e-2145.78tRNA pseudouridine synthase A, mitochondrial OS=Ho... [more]
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