TCONS_00052316-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052316-protein
Unique NameTCONS_00052316-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length405

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052316-protein ID=TCONS_00052316-protein|Name=TCONS_00052316-protein|organism=Clytia hemisphaerica|type=polypeptide|length=405bp
MYIMREPSLLSPSTSDTNNITMNKVLCVYANTSPEKCYPTNSVRGFLTFL
LVVVVVISLFGNLLLCGIVYRRSAMRSAINLLLANVALTDFLLVLLHVPV
ALAVLNSTGWPFNQPFCRFNGFIFQMLNCEKVLVLLVISIDRYFIIVKRC
DTLTPHKSKILICSTWVISFIVAIPPVLGWGVFRFTEGSTQCLVHGSLGD
IDMLAKSYILFSSAVTVMTPTLALLFIYYRILRTVRRNGFRIQNHPPVTP
TAMHKKGKYFIDYCYKTRMSTTILLLSLFYILSIFPLGVVNMIIALHQYG
AVSMETVVGVLIFSYLHSASSPLLYYWRIKKYRKIVNDLCVQIFVFPHCV
LFSAHRKRRVRPHVVYKVEEMNLKYINGXKYLFFRIVCYFPLTGNAGSAL
TSFTK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033085XLOC_033085Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052316TCONS_00052316Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 46..70
score: 23.99
coord: 124..146
score: 27.49
coord: 157..178
score: 23.57
coord: 307..333
score: 21.67
coord: 209..232
score: 20.74
coord: 79..100
score: 26.64
coord: 269..293
score: 15.09
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 61..325
e-value: 2.4E-35
score: 122.0
NoneNo IPR availableGENE3D1.20.1070.10coord: 10..342
e-value: 1.6E-50
score: 171.2
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 32..342
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 61..325
score: 33.792

Blast
[Close]
BLAST of TCONS_00052316-protein vs. Swiss-Prot (Human)
Match: GPR63 (Probable G-protein coupled receptor 63 OS=Homo sapiens GN=GPR63 PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 1.082e-56
Identity = 117/337 (34.72%), Postives = 186/337 (55.19%), Query Frame = 0 
Query:   47 LTFLLVVVVVISLFGNLLLCGIVYRRSAMRSAINLLLANVALTDFLLVLLHVPVALAVLNSTGWPFNQPFCRFNGFIFQMLNCEKVLVLLVISIDRYFIIVKRCDTLTPHKSKILICSTWVISFIVAIPPVLGWGVFRFTEGSTQCLVHGSLGDIDMLAKSYILFSSAVTVMTPTLALLFIYYRILRTVRRNGFRIQNHPP---------VTPTAMHKKGKYFIDYCYKTRMSTTILLLSLFYILSIFPLGVVNMIIALHQ---YGAVSMETVVGVLIFSYLHSASSPLLYYWRIKKYRKIVNDLCVQIFVF-PHCVLFSAHRKRRVRPHVVYKVEE 370
            L+ +++ ++ +S  GNL++C +VY+++AMRSAIN+LLA++A  D LL +L++P AL  + +T W F + FCR +   F +   E V +LL+ISIDR+ IIV+R D L P+++K+LI  +W  SF VA P  +G    +    + QC V G   +     ++Y++  S ++   P L +L+ +  IL T+R N  RI ++P          +   ++ +  +  ID  +KTR  TTIL+L   +I+   P    +++    +   Y     E    +L   YL SA +PL+YYWRIKK+     D+  + F F P       H KRR+RP  VY   E
Sbjct:   84 LSAIMIFILFVSFLGNLVVCLMVYQKAAMRSAINILLASLAFADMLLAVLNMPFALVTILTTRWIFGKFFCRVSAMFFWLFVIEGVAILLIISIDRFLIIVQRQDKLNPYRAKVLIAVSWATSFCVAFPLAVGNPDLQIPSRAPQC-VFGYTTNPGY--QAYVILISLISFFIPFLVILYSFMGILNTLRHNALRIHSYPEGICLSQASKLGLMSLQRPFQMSIDMGFKTRAFTTILILFAVFIVCWAPFTTYSLVATFSKHFYYQHNFFEISTWLLWLCYLKSALNPLIYYWRIKKFHDACLDMMPKSFKFLPQ---LPGHTKRRIRPSAVYVCGE 414
The following BLAST results are available for this feature:
BLAST of TCONS_00052316-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GPR631.082e-5634.72Probable G-protein coupled receptor 63 OS=Homo sap... [more]
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