TCONS_00052375-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052375-protein
Unique NameTCONS_00052375-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length233

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052375-protein ID=TCONS_00052375-protein|Name=TCONS_00052375-protein|organism=Clytia hemisphaerica|type=polypeptide|length=233bp
MESYLGDHKVAIDFIKSCGSHLCLSASPIATGCVLYHRIVRKQLELKERD
VDIEKYLLATTCLYLGAKIEEEPQKIRDVINVAHRLLHQDEKALEIGDDY
WKLHDSVTACELIVLRYLKFQVTFDSPIKYILMFCKSLEDWLPDSNILHQ
SKLPQICWNMVNDLCYLPLVIFYPAEVVAASIVYIALEVTHLEIPEHKEG
KRWFQVLCPGIKENKLKDIGCKILTLYDHIKVK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033112XLOC_033112Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052375TCONS_00052375Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR006671Cyclin_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeGENE3D1.10.472.10coord: 116..233
e-value: 7.6E-16
score: 57.6
IPR013763Cyclin-likeGENE3D1.10.472.10coord: 3..115
e-value: 4.5E-22
score: 77.8
IPR013763Cyclin-likeSUPERFAMILY47954Cyclin-likecoord: 8..122
IPR013763Cyclin-likeSUPERFAMILY47954Cyclin-likecoord: 126..231
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 9..122
e-value: 2.6E-10
score: 40.1
NoneNo IPR availablePIRSFPIRSF028758Cyclin_C_H_Gcoord: 2..233
e-value: 1.2E-15
score: 55.4
NoneNo IPR availableCDDcd00043CYCLINcoord: 11..90
e-value: 1.10895E-6
score: 43.7665

Blast
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BLAST of TCONS_00052375-protein vs. Swiss-Prot (Human)
Match: FA58A (Cyclin-related protein FAM58A OS=Homo sapiens GN=FAM58A PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 6.343e-38
Identity = 68/216 (31.48%), Postives = 127/216 (58.80%), Query Frame = 0 
Query:   14 FIKSCGSHLCLSASPIATGCVLYHRIVRKQLELKERDVDI-EKYLLATTCLYLGAKIEEEPQKIRDVINVAHRLLHQDEKALEIGDDYWKLHDSVTACELIVLRYLKFQVTFDSPIKYILMFCKSLEDWLPDSNILHQSKLPQICWNMVNDLCYLPLVIFYPAEVVAASIVYIALEVTHLEIPEHKEGKR-WFQVLCPGIKENKLKDIGCKILTLY 227
            FI   G  L + + PIAT C +YH+         E ++D  + YL+A + +YL  K+EE+  + RD+INV++R  +   + LE+   +W+L DS+  CEL++LR L+FQV+F  P KY+L +  SL++WL + +   ++ +    W ++ D  +  L + + A+ +A +++Y+AL+V  +E+P   E ++ W+QV    + +  + +I   ++ +Y
Sbjct:   33 FIMEAGVKLGMRSIPIATACTIYHKF------FCETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSGEPLELDSRFWELRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLVSLQNWL-NRHSWQRTPVAVTAWALLRDSYHGALCLRFQAQHIAVAVLYLALQVYGVEVPAEVEAEKPWWQVFNDDLTKPIIDNIVSDLIQIY 241
The following BLAST results are available for this feature:
BLAST of TCONS_00052375-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FA58A6.343e-3831.48Cyclin-related protein FAM58A OS=Homo sapiens GN=F... [more]
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